Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC3P40938 MTCO1P30-201ENST00000515244 580 ntBASIC3.31□□□□□ -1.88
RFC3P40938 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
RFC3P40938 SUMO2P20-201ENST00000520803 283 ntBASIC3.31□□□□□ -1.88
RFC3P40938 HIGD1AP10-201ENST00000527837 282 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC139103.1-201ENST00000534696 1030 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC3P40938 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
RFC3P40938 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC3P40938 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC3P40938 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC3P40938 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC3P40938 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
RFC3P40938 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC017100.2-201ENST00000584628 355 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC007179.3-201ENST00000604976 235 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC092354.2-201ENST00000607786 514 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC091905.1-201ENST00000624400 311 ntBASIC3.31□□□□□ -1.88
RFC3P40938 AC083865.1-201ENST00000636634 831 ntBASIC3.31□□□□□ -1.88
RFC3P40938 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFC3P40938 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC3P40938 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFC3P40938 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC3P40938 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 NSRP1P1-201ENST00000444067 1693 ntBASIC3.3□□□□□ -1.88
RFC3P40938 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RFC3P40938 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC3P40938 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 AF127577.6-201ENST00000623352 2191 ntBASIC3.3□□□□□ -1.88
RFC3P40938 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 RNU6-883P-201ENST00000384597 107 ntBASIC3.3□□□□□ -1.88
RFC3P40938 HLFP1-201ENST00000402375 499 ntBASIC3.3□□□□□ -1.88
RFC3P40938 PRRC2CP1-201ENST00000404428 159 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC007390.1-201ENST00000415722 356 ntBASIC3.3□□□□□ -1.88
RFC3P40938 LIPT1P1-201ENST00000415870 1186 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC241520.1-201ENST00000422654 1099 ntBASIC3.3□□□□□ -1.88
RFC3P40938 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.3□□□□□ -1.88
RFC3P40938 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC3P40938 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC3P40938 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC068135.1-201ENST00000446164 246 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC006480.1-201ENST00000449887 378 ntBASIC3.3□□□□□ -1.88
RFC3P40938 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
RFC3P40938 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC3P40938 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC092451.1-201ENST00000480211 153 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC074250.1-201ENST00000511117 192 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC093755.1-201ENST00000512950 1023 ntBASIC3.3□□□□□ -1.88
RFC3P40938 RN7SKP96-201ENST00000516948 297 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AC010306.1-201ENST00000523223 1117 ntBASIC3.3□□□□□ -1.88
RFC3P40938 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 OR6C73P-201ENST00000546432 358 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AL121766.1-201ENST00000547436 487 ntBASIC3.3□□□□□ -1.88
RFC3P40938 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC3P40938 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC3P40938 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.3□□□□□ -1.88
RFC3P40938 ELOCP35-201ENST00000604289 336 ntBASIC3.3□□□□□ -1.88
RFC3P40938 AL161756.2-201ENST00000604597 246 ntBASIC3.3□□□□□ -1.88
RFC3P40938 MIR8058-201ENST00000615737 89 ntBASIC3.3□□□□□ -1.88
RFC3P40938 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
RFC3P40938 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC3P40938 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFC3P40938 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
RFC3P40938 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 AC007656.2-201ENST00000624902 4547 ntBASIC3.3□□□□□ -1.88
RFC3P40938 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC3P40938 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RFC3P40938 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 AL353746.1-201ENST00000566293 6881 ntBASIC3.29□□□□□ -1.88
RFC3P40938 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
RFC3P40938 AL512646.1-201ENST00000269395 1077 ntBASIC3.29□□□□□ -1.88
RFC3P40938 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
RFC3P40938 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC3P40938 BTBD10P2-201ENST00000404779 676 ntBASIC3.29□□□□□ -1.88
RFC3P40938 MTHFD2P2-201ENST00000407725 247 ntBASIC3.29□□□□□ -1.88
RFC3P40938 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.29□□□□□ -1.88
RFC3P40938 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC3P40938 BX842559.1-201ENST00000419615 532 ntBASIC3.29□□□□□ -1.88
RFC3P40938 AC023128.2-201ENST00000420880 1223 ntBASIC3.29□□□□□ -1.88
RFC3P40938 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC3P40938 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
RFC3P40938 AL159987.2-201ENST00000432754 307 ntBASIC3.29□□□□□ -1.88
RFC3P40938 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC3P40938 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.29□□□□□ -1.88
RFC3P40938 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.29□□□□□ -1.88
RFC3P40938 AC098824.1-201ENST00000453565 980 ntBASIC3.29□□□□□ -1.88
RFC3P40938 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms