Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC138761.5-201ENST00000433967 325 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 RPS10P14-201ENST00000440748 502 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.03□□□□□ -1.28
CLCN1P35523 GAS5-223ENST00000452197 483 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 snoU13.7-201ENST00000459220 104 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 AC128713.1-201ENST00000471495 306 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 AC008526.1-201ENST00000509149 338 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 RNU6-635P-201ENST00000516651 102 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 RNA5SP230-201ENST00000517039 122 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 AL133153.1-201ENST00000557756 303 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC060780.2-201ENST00000589047 198 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.03□□□□□ -1.28
CLCN1P35523 SNORD96A-201ENST00000606577 79 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC011890.2-201ENST00000613393 294 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 AC092608.2-201ENST00000624427 218 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 API5P2-201ENST00000397055 1498 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 PAPPA-AS1-201ENST00000445861 2450 ntBASIC7.03□□□□□ -1.28
CLCN1P35523 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.03□□□□□ -1.28
CLCN1P35523 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLCN1P35523 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.02□□□□□ -1.28
CLCN1P35523 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.28
CLCN1P35523 AC023245.2-201ENST00000530760 2978 ntBASIC7.02□□□□□ -1.28
CLCN1P35523 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CLCN1P35523 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 BRAFP1-201ENST00000445336 2703 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 TPTE2P4-201ENST00000258589 1605 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 PPIAP24-201ENST00000328558 471 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 RNA5SP140-201ENST00000364524 92 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 Y_RNA.252-201ENST00000364556 101 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 RNU5E-6P-201ENST00000365574 115 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 Y_RNA.463-201ENST00000384271 102 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 Y_RNA.574-201ENST00000384766 95 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CLCN1P35523 AL391417.1-201ENST00000404100 426 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AL353133.1-201ENST00000407695 401 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 RNU4-25P-201ENST00000410569 230 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AL359092.1-201ENST00000417156 265 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC093155.2-201ENST00000420734 937 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 SPATA20P1-201ENST00000423089 438 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AL354707.3-201ENST00000427308 331 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 SNAP23P1-201ENST00000433229 246 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 SLAMF6P1-201ENST00000451067 602 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AF213884.1-201ENST00000488102 463 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.02□□□□□ -1.29
CLCN1P35523 HMGB1P21-201ENST00000502313 581 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 HIGD1AP13-201ENST00000509878 289 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.02□□□□□ -1.29
CLCN1P35523 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 RNU6-1016P-201ENST00000516689 94 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 AC009852.2-201ENST00000567898 485 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.02□□□□□ -1.29
CLCN1P35523 RPL29P33-201ENST00000587474 316 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.02□□□□□ -1.29
CLCN1P35523 AC023813.4-201ENST00000607580 580 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 MIR6849-201ENST00000618543 69 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AL353662.3-201ENST00000625131 237 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.02□□□□□ -1.29
CLCN1P35523 AC007603.3-201ENST00000636915 979 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLCN1P35523 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
CLCN1P35523 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 AL445437.1-201ENST00000623157 3087 ntBASIC7.02□□□□□ -1.29
CLCN1P35523 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CLCN1P35523 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms