Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 TATDN1P1-201ENST00000414123 891 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL158825.1-201ENST00000414735 521 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL049610.1-201ENST00000423374 372 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.5□□□□□ -1.85
RORAP35398 NEK4P1-201ENST00000433383 879 ntBASIC3.5□□□□□ -1.85
RORAP35398 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 AL590399.6-201ENST00000446396 307 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 SNORD105B-201ENST00000458770 79 ntBASIC3.5□□□□□ -1.85
RORAP35398 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 TRBV12-2-201ENST00000489763 344 ntBASIC3.5□□□□□ -1.85
RORAP35398 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 AC110768.1-201ENST00000509222 400 ntBASIC3.5□□□□□ -1.85
RORAP35398 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.5□□□□□ -1.85
RORAP35398 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 RANP9-201ENST00000519957 271 ntBASIC3.5□□□□□ -1.85
RORAP35398 OR7E13P-201ENST00000526052 910 ntBASIC3.5□□□□□ -1.85
RORAP35398 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.5□□□□□ -1.85
RORAP35398 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 SNRPGP1-201ENST00000553864 222 ntBASIC3.5□□□□□ -1.85
RORAP35398 AC025918.2-201ENST00000558683 763 ntBASIC3.5□□□□□ -1.85
RORAP35398 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.5□□□□□ -1.85
RORAP35398 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 MIR3922-201ENST00000585192 84 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL163642.2-201ENST00000604722 1019 ntBASIC3.5□□□□□ -1.85
RORAP35398 U3.45-201ENST00000607547 219 ntBASIC3.5□□□□□ -1.85
RORAP35398 AC092354.2-201ENST00000607786 514 ntBASIC3.5□□□□□ -1.85
RORAP35398 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 AC012314.7-201ENST00000619693 93 ntBASIC3.5□□□□□ -1.85
RORAP35398 AC091905.1-201ENST00000624400 311 ntBASIC3.5□□□□□ -1.85
RORAP35398 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.5□□□□□ -1.85
RORAP35398 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
RORAP35398 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.5□□□□□ -1.85
RORAP35398 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RORAP35398 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RORAP35398 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 RNU6-600P-201ENST00000362524 99 ntBASIC3.49□□□□□ -1.85
RORAP35398 RNU6-543P-201ENST00000362576 108 ntBASIC3.49□□□□□ -1.85
RORAP35398 MIR183-201ENST00000384958 110 ntBASIC3.49□□□□□ -1.85
RORAP35398 AP000567.1-201ENST00000406413 156 ntBASIC3.49□□□□□ -1.85
RORAP35398 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.49□□□□□ -1.85
RORAP35398 CYCSP4-201ENST00000429682 331 ntBASIC3.49□□□□□ -1.85
RORAP35398 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.49□□□□□ -1.85
RORAP35398 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.49□□□□□ -1.85
RORAP35398 MTCO1P43-201ENST00000431831 488 ntBASIC3.49□□□□□ -1.85
RORAP35398 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
RORAP35398 SETP5-201ENST00000437270 562 ntBASIC3.49□□□□□ -1.85
RORAP35398 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 HMGB1P12-201ENST00000438594 598 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
RORAP35398 RPS27P5-201ENST00000444247 244 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC073387.1-201ENST00000453261 709 ntBASIC3.49□□□□□ -1.85
RORAP35398 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 AC004801.2-202ENST00000463559 283 ntBASIC3.49□□□□□ -1.85
RORAP35398 TRBV8-2-201ENST00000475637 270 ntBASIC3.49□□□□□ -1.85
RORAP35398 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.49□□□□□ -1.85
RORAP35398 OR8I1P-201ENST00000529291 931 ntBASIC3.49□□□□□ -1.85
RORAP35398 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.49□□□□□ -1.85
RORAP35398 AL121766.1-201ENST00000547436 487 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.49□□□□□ -1.85
RORAP35398 MIR3186-201ENST00000577404 85 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.49□□□□□ -1.85
RORAP35398 BRDTP1-201ENST00000605735 677 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC084757.4-201ENST00000616350 526 ntBASIC3.49□□□□□ -1.85
RORAP35398 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RORAP35398 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
RORAP35398 AC083865.1-201ENST00000636634 831 ntBASIC3.49□□□□□ -1.85
RORAP35398 U6.105-201ENST00000637379 88 ntBASIC3.49□□□□□ -1.85
RORAP35398 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
RORAP35398 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 AL353746.1-201ENST00000566293 6881 ntBASIC3.49□□□□□ -1.85
RORAP35398 RIOK3P1-201ENST00000418778 1528 ntBASIC3.49□□□□□ -1.85
RORAP35398 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RORAP35398 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RORAP35398 AL049781.1-201ENST00000623195 3585 ntBASIC3.48□□□□□ -1.85
RORAP35398 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RORAP35398 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
RORAP35398 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RORAP35398 HMGB3P18-201ENST00000406327 590 ntBASIC3.48□□□□□ -1.85
RORAP35398 RN7SKP285-201ENST00000410137 318 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC068533.1-201ENST00000418542 415 ntBASIC3.48□□□□□ -1.85
RORAP35398 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 PNRC2P1-201ENST00000423940 420 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms