Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 SEC63P2-201ENST00000503863 1939 ntBASIC3.48□□□□□ -1.85
SHMT2P34897 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.48□□□□□ -1.85
SHMT2P34897 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHMT2P34897 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.47□□□□□ -1.85
SHMT2P34897 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.47□□□□□ -1.85
SHMT2P34897 AL136116.1-201ENST00000403591 381 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 HNRNPDP2-201ENST00000406475 478 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 MTATP6P19-201ENST00000413797 659 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC069157.1-201ENST00000421749 137 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC091286.1-201ENST00000431233 461 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 PDSS1P2-201ENST00000449397 678 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 MRPL35P4-201ENST00000453682 566 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC023598.1-201ENST00000472521 361 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC006499.5-201ENST00000505037 514 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 HMGN1P15-201ENST00000513870 295 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 OR8I1P-201ENST00000529291 931 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC011602.1-201ENST00000546484 331 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 AL136520.1-202ENST00000555494 763 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 MIR4429-201ENST00000580105 73 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC007687.1-201ENST00000602704 304 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC008739.3-201ENST00000603262 127 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC096586.1-201ENST00000610267 561 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 VN1R9P-201ENST00000614184 867 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.47□□□□□ -1.85
SHMT2P34897 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SHMT2P34897 AC000367.1-201ENST00000452711 1766 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.47□□□□□ -1.85
SHMT2P34897 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
SHMT2P34897 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHMT2P34897 AL133383.2-201ENST00000622958 2336 ntBASIC3.47□□□□□ -1.85
SHMT2P34897 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
SHMT2P34897 MTCO1P4-201ENST00000520516 1409 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 MIR218-2-201ENST00000385006 110 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 UBE2D3P3-201ENST00000426992 425 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 MTCO1P43-201ENST00000431831 488 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.46□□□□□ -1.86
SHMT2P34897 AC105402.2-201ENST00000438503 358 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 AP000873.1-201ENST00000463987 400 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 SETP6-201ENST00000479329 568 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC073522.1-201ENST00000483312 377 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.46□□□□□ -1.86
SHMT2P34897 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC090071.1-201ENST00000507713 644 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC110792.2-201ENST00000510278 224 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC121161.1-201ENST00000510606 652 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 AL139174.1-201ENST00000531489 886 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.46□□□□□ -1.86
SHMT2P34897 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.46□□□□□ -1.86
SHMT2P34897 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.46□□□□□ -1.86
SHMT2P34897 ATP5F1P7-201ENST00000567330 760 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC090312.2-201ENST00000582687 378 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.46□□□□□ -1.86
SHMT2P34897 AL392112.1-201ENST00000605115 829 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms