Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.68□□□□□ -1.82
CASQ1P31415 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC073476.4-201ENST00000628409 72 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.68□□□□□ -1.82
CASQ1P31415 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 AC032011.1-201ENST00000611703 1549 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 MTND5P28-201ENST00000438005 1594 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
CASQ1P31415 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CASQ1P31415 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASQ1P31415 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASQ1P31415 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASQ1P31415 MIR421-201ENST00000365696 85 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASQ1P31415 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASQ1P31415 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC233728.2-201ENST00000425348 757 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 Z85994.2-201ENST00000434327 452 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.67□□□□□ -1.82
CASQ1P31415 AL445669.2-201ENST00000454425 421 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC025459.1-201ENST00000504072 156 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.67□□□□□ -1.82
CASQ1P31415 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC009643.1-201ENST00000532030 391 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.67□□□□□ -1.82
CASQ1P31415 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 MIR5096-201ENST00000583713 70 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 MAGOH2P-202ENST00000584384 429 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC005344.1-201ENST00000613391 459 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AL110115.1-201ENST00000614396 364 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AC069209.1-201ENST00000619282 651 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.67□□□□□ -1.82
CASQ1P31415 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.67□□□□□ -1.82
CASQ1P31415 AC090897.3-201ENST00000636973 1157 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AP002907.1-201ENST00000606361 1430 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 AL122126.1-201ENST00000546905 1318 ntBASIC3.67□□□□□ -1.82
CASQ1P31415 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CASQ1P31415 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CASQ1P31415 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.66□□□□□ -1.82
CASQ1P31415 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.66□□□□□ -1.82
CASQ1P31415 YPEL5P1-201ENST00000419731 367 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.66□□□□□ -1.82
CASQ1P31415 SNRPEP4-201ENST00000435815 279 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.66□□□□□ -1.82
CASQ1P31415 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.66□□□□□ -1.82
CASQ1P31415 AC069540.1-201ENST00000446320 988 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 CYCSP42-201ENST00000450823 238 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 AC010301.1-201ENST00000473936 355 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 SNORA31.20-201ENST00000517111 133 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.66□□□□□ -1.82
CASQ1P31415 SERPINE4P-201ENST00000554978 281 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.66□□□□□ -1.82
CASQ1P31415 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 AC013244.1-201ENST00000604279 193 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 AC006111.3-201ENST00000622137 383 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASQ1P31415 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.66□□□□□ -1.82
CASQ1P31415 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.66□□□□□ -1.82
CASQ1P31415 AP004289.2-201ENST00000444413 1457 ntBASIC3.66□□□□□ -1.82
CASQ1P31415 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
CASQ1P31415 MAPK10-322ENST00000641485 4530 ntBASIC3.65□□□□□ -1.82
CASQ1P31415 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CASQ1P31415 RNU6-1243P-201ENST00000364028 107 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 RPL21P3-201ENST00000395517 478 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AL022722.2-201ENST00000402519 180 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 SFR1P1-201ENST00000403720 688 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 RPL5P18-201ENST00000406671 891 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 MIR1303-201ENST00000408625 86 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 RNU4-74P-201ENST00000411280 161 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC007899.1-201ENST00000412776 775 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 Z99755.1-201ENST00000414048 380 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 RBMY2KP-201ENST00000418221 992 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC093151.1-201ENST00000427711 313 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.65□□□□□ -1.83
CASQ1P31415 AC244505.4-201ENST00000434905 287 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.65□□□□□ -1.83
CASQ1P31415 SSXP5-201ENST00000443473 287 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.65□□□□□ -1.83
CASQ1P31415 AC146507.2-201ENST00000460608 476 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 AC104472.2-201ENST00000469035 601 ntBASIC3.65□□□□□ -1.83
CASQ1P31415 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms