Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MSH3P20585 AL645939.1-201ENST00000453429 797 ntBASIC4.02□□□□□ -1.77
MSH3P20585 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.02□□□□□ -1.77
MSH3P20585 RN7SL860P-201ENST00000473738 223 ntBASIC4.02□□□□□ -1.77
MSH3P20585 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
MSH3P20585 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.02□□□□□ -1.77
MSH3P20585 AC146944.2-203ENST00000502493 354 ntBASIC4.02□□□□□ -1.77
MSH3P20585 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.02□□□□□ -1.77
MSH3P20585 AC139495.1-202ENST00000513164 354 ntBASIC4.02□□□□□ -1.77
MSH3P20585 MIR2116-201ENST00000517221 80 ntBASIC4.02□□□□□ -1.77
MSH3P20585 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH3P20585 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 AP001317.1-201ENST00000531194 960 ntBASIC4.02□□□□□ -1.77
MSH3P20585 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.02□□□□□ -1.77
MSH3P20585 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH3P20585 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.02□□□□□ -1.77
MSH3P20585 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH3P20585 AC007599.1-201ENST00000568688 1174 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC079171.1-201ENST00000568788 914 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AL354943.1-201ENST00000572103 781 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH3P20585 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.02□□□□□ -1.77
MSH3P20585 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MSH3P20585 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 AL353778.1-201ENST00000603149 408 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 AC114878.2-201ENST00000604863 1251 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC069545.1-201ENST00000605671 358 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.02□□□□□ -1.77
MSH3P20585 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 AC105227.2-201ENST00000615075 605 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC000123.2-201ENST00000623124 461 ntBASIC4.02□□□□□ -1.77
MSH3P20585 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH3P20585 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MSH3P20585 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MSH3P20585 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 DCAF13P3-201ENST00000561147 1334 ntBASIC4.01□□□□□ -1.77
MSH3P20585 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 FAM133CP-201ENST00000332869 704 ntBASIC4.01□□□□□ -1.77
MSH3P20585 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 Y_RNA.465-201ENST00000384293 102 ntBASIC4.01□□□□□ -1.77
MSH3P20585 SNORD65.1-201ENST00000390889 71 ntBASIC4.01□□□□□ -1.77
MSH3P20585 RNA5SP317-201ENST00000410176 116 ntBASIC4.01□□□□□ -1.77
MSH3P20585 RNA5SP311-201ENST00000411290 116 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AL356095.1-201ENST00000417217 199 ntBASIC4.01□□□□□ -1.77
MSH3P20585 PAICSP7-201ENST00000419829 962 ntBASIC4.01□□□□□ -1.77
MSH3P20585 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 NIPA2P1-201ENST00000426223 976 ntBASIC4.01□□□□□ -1.77
MSH3P20585 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 SETP8-201ENST00000435341 628 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 RPL23AP76-201ENST00000441860 458 ntBASIC4.01□□□□□ -1.77
MSH3P20585 SETD6P1-201ENST00000444575 317 ntBASIC4.01□□□□□ -1.77
MSH3P20585 HMGB1P48-201ENST00000446155 598 ntBASIC4.01□□□□□ -1.77
MSH3P20585 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 AC093755.1-201ENST00000512950 1023 ntBASIC4.01□□□□□ -1.77
MSH3P20585 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 RNA5SP315-201ENST00000516340 116 ntBASIC4.01□□□□□ -1.77
MSH3P20585 RNA5SP312-201ENST00000517068 116 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH3P20585 AGGF1P6-201ENST00000569213 976 ntBASIC4.01□□□□□ -1.77
MSH3P20585 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
MSH3P20585 AC128687.2-201ENST00000609657 566 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AC097478.2-201ENST00000610572 514 ntBASIC4.01□□□□□ -1.77
MSH3P20585 MIR6867-201ENST00000610636 67 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AC023158.2-201ENST00000614876 543 ntBASIC4.01□□□□□ -1.77
MSH3P20585 ZYXP1-201ENST00000617638 118 ntBASIC4.01□□□□□ -1.77
MSH3P20585 AC022509.4-201ENST00000621404 572 ntBASIC4.01□□□□□ -1.77
MSH3P20585 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 AC104454.1-201ENST00000421341 1401 ntBASIC4.01□□□□□ -1.77
MSH3P20585 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH3P20585 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH3P20585 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MSH3P20585 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MSH3P20585 AC095050.2-201ENST00000510748 1458 ntBASIC4□□□□□ -1.77
MSH3P20585 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms