Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HMGB1P6-201ENST00000569046 646 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGA1P17096 AC096947.1-201ENST00000603233 470 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 AC243756.2-201ENST00000618406 463 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGA1P17096 AP003499.2-201ENST00000624100 483 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 AL450326.2-201ENST00000421913 1962 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HMGA1P17096 ASNSP1-201ENST00000518311 1939 ntBASIC2.97□□□□□ -1.93
HMGA1P17096 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.93
HMGA1P17096 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HMGA1P17096 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HMGA1P17096 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HMGA1P17096 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGA1P17096 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HMGA1P17096 AL360182.1-201ENST00000397433 468 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGA1P17096 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HMGA1P17096 RNA5SP184-201ENST00000411071 108 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGA1P17096 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 BTG3P1-201ENST00000435859 716 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 AL109933.2-201ENST00000452651 260 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 RPS27P29-201ENST00000463110 252 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC093278.1-201ENST00000494700 600 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGA1P17096 RN7SKP43-201ENST00000516173 320 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 FAM60DP-201ENST00000524174 632 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AC087276.1-201ENST00000529659 480 ntBASIC2.96□□□□□ -1.94
HMGA1P17096 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HMGA1P17096 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
HMGA1P17096 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGA1P17096 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HMGA1P17096 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HMGA1P17096 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HMGA1P17096 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HMGA1P17096 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGA1P17096 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 RPS15AP6-201ENST00000420703 385 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC034159.1-201ENST00000513885 583 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 AL049874.4-201ENST00000557593 255 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGA1P17096 AC022146.1-201ENST00000595307 847 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGA1P17096 OR6R2P-201ENST00000609216 300 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 AC009039.2-201ENST00000624524 529 ntBASIC2.95□□□□□ -1.94
HMGA1P17096 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HMGA1P17096 OR11H5P-202ENST00000641612 1325 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGA1P17096 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGA1P17096 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGA1P17096 RNU1-35P-201ENST00000362782 153 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
HMGA1P17096 SNORA70E-201ENST00000384492 135 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGA1P17096 AC234781.4-201ENST00000419384 244 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AC245517.2-201ENST00000442890 346 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGA1P17096 RPL21P41-201ENST00000459863 264 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGA1P17096 SETP12-201ENST00000514068 805 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGA1P17096 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGA1P17096 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGA1P17096 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGA1P17096 AC010680.3-201ENST00000604215 520 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGA1P17096 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGA1P17096 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGA1P17096 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.94□□□□□ -1.94
HMGA1P17096 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGA1P17096 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.94□□□□□ -1.94
HMGA1P17096 PNPT1P2-201ENST00000456768 2050 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGA1P17096 AC008725.1-201ENST00000605123 2263 ntBASIC2.94□□□□□ -1.94
HMGA1P17096 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGA1P17096 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC017002.4-201ENST00000604721 1525 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AC093311.1-201ENST00000506586 2021 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AL606537.1-201ENST00000607258 2011 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms