Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFRAP16234 NDUFA5P2-201ENST00000519723 344 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AC019227.1-201ENST00000526902 510 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 DEFB130C-202ENST00000530001 230 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 OR4A12P-201ENST00000530847 918 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFRAP16234 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFRAP16234 AC122134.1-202ENST00000569111 1201 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFRAP16234 AC022916.3-201ENST00000592961 742 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFRAP16234 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFRAP16234 AL592436.1-201ENST00000605135 558 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AL109618.2-201ENST00000605527 211 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AL139022.2-201ENST00000606934 443 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AC092953.2-201ENST00000608000 699 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFRAP16234 AC006065.5-201ENST00000623427 349 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 AC098679.5-201ENST00000624394 571 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PDGFRAP16234 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PDGFRAP16234 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PDGFRAP16234 MTCO1P24-201ENST00000515438 1558 ntBASIC4.1□□□□□ -1.75
PDGFRAP16234 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFRAP16234 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDGFRAP16234 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDGFRAP16234 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 RNU6-582P-201ENST00000362989 107 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 RNU6-115P-201ENST00000364310 107 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 RNU1-64P-201ENST00000365443 163 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFRAP16234 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
PDGFRAP16234 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 MIR217-201ENST00000384817 110 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 Z97055.1-201ENST00000419730 712 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AL138799.3-201ENST00000438968 350 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.09□□□□□ -1.75
PDGFRAP16234 HMGB3P22-202ENST00000451823 572 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 HMGN2P7-201ENST00000456186 273 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC092451.1-201ENST00000480211 153 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 AP001086.1-201ENST00000494882 321 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFRAP16234 HIGD1AP3-201ENST00000515857 278 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 IGKV2D-23-201ENST00000518179 286 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.09□□□□□ -1.75
PDGFRAP16234 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFRAP16234 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC009101.1-201ENST00000568135 242 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFRAP16234 AC007687.1-201ENST00000602704 304 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AP003973.1-201ENST00000604639 691 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC024060.1-201ENST00000607052 494 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AL391834.2-201ENST00000609982 546 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AL592148.2-201ENST00000612210 372 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC087821.2-201ENST00000637086 450 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 AC099654.8-201ENST00000637757 681 ntBASIC4.09□□□□□ -1.75
PDGFRAP16234 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFRAP16234 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
PDGFRAP16234 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDGFRAP16234 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.09□□□□□ -1.76
PDGFRAP16234 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PDGFRAP16234 AC117529.2-201ENST00000512159 2068 ntBASIC4.09□□□□□ -1.76
PDGFRAP16234 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 RNU5E-10P-201ENST00000363506 118 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RNU1-85P-201ENST00000364127 164 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 SNORD6-201ENST00000365444 73 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PDGFRAP16234 RNU6-1226P-201ENST00000384317 107 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RNU6-921P-201ENST00000384361 107 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 MIR649-201ENST00000384843 97 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RNA5SP39-201ENST00000411245 120 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 VN1R51P-201ENST00000411675 945 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms