Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL590099.1-201ENST00000615276 138 ntBASIC7.76□□□□□ -1.17
CD44P16070 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.76□□□□□ -1.17
CD44P16070 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.76□□□□□ -1.17
CD44P16070 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 AL592148.3-201ENST00000608771 2646 ntBASIC7.76□□□□□ -1.17
CD44P16070 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.75□□□□□ -1.17
CD44P16070 AC007938.1-201ENST00000562524 2902 ntBASIC7.75□□□□□ -1.17
CD44P16070 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CD44P16070 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.75□□□□□ -1.17
CD44P16070 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CD44P16070 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
CD44P16070 RNU6-1301P-201ENST00000362724 104 ntBASIC7.75□□□□□ -1.17
CD44P16070 RNU6-199P-201ENST00000362954 107 ntBASIC7.75□□□□□ -1.17
CD44P16070 MIR521-1-201ENST00000384902 87 ntBASIC7.75□□□□□ -1.17
CD44P16070 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.75□□□□□ -1.17
CD44P16070 RNA5SP177-201ENST00000410122 107 ntBASIC7.75□□□□□ -1.17
CD44P16070 RN7SKP159-201ENST00000410657 292 ntBASIC7.75□□□□□ -1.17
CD44P16070 RNU5A-5P-201ENST00000411054 116 ntBASIC7.75□□□□□ -1.17
CD44P16070 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.75□□□□□ -1.17
CD44P16070 AL359633.1-201ENST00000421403 310 ntBASIC7.75□□□□□ -1.17
CD44P16070 RPS21P1-201ENST00000434479 247 ntBASIC7.75□□□□□ -1.17
CD44P16070 RPLP0P1-201ENST00000457002 361 ntBASIC7.75□□□□□ -1.17
CD44P16070 AC006511.1-201ENST00000470614 315 ntBASIC7.75□□□□□ -1.17
CD44P16070 RN7SL314P-201ENST00000490735 292 ntBASIC7.75□□□□□ -1.17
CD44P16070 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.75□□□□□ -1.17
CD44P16070 RN7SL143P-201ENST00000496780 297 ntBASIC7.75□□□□□ -1.17
CD44P16070 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.75□□□□□ -1.17
CD44P16070 Y_RNA.689-201ENST00000516589 107 ntBASIC7.75□□□□□ -1.17
CD44P16070 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC7.75□□□□□ -1.17
CD44P16070 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.75□□□□□ -1.17
CD44P16070 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.75□□□□□ -1.17
CD44P16070 AC020765.1-201ENST00000604296 328 ntBASIC7.75□□□□□ -1.17
CD44P16070 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 AL365440.1-201ENST00000436135 2167 ntBASIC7.75□□□□□ -1.17
CD44P16070 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CD44P16070 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.75□□□□□ -1.17
CD44P16070 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.74□□□□□ -1.17
CD44P16070 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 AC112243.1-201ENST00000623949 3851 ntBASIC7.74□□□□□ -1.17
CD44P16070 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 Y_RNA.558-201ENST00000384685 113 ntBASIC7.74□□□□□ -1.17
CD44P16070 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CD44P16070 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CD44P16070 CTSL3P-202ENST00000412179 788 ntBASIC7.74□□□□□ -1.17
CD44P16070 SNX18P13-201ENST00000412442 529 ntBASIC7.74□□□□□ -1.17
CD44P16070 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 BX323845.3-201ENST00000428215 527 ntBASIC7.74□□□□□ -1.17
CD44P16070 FTLP17-201ENST00000432567 525 ntBASIC7.74□□□□□ -1.17
CD44P16070 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.74□□□□□ -1.17
CD44P16070 RPL26P6-201ENST00000440913 438 ntBASIC7.74□□□□□ -1.17
CD44P16070 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC7.74□□□□□ -1.17
CD44P16070 RNU7-197P-201ENST00000458836 62 ntBASIC7.74□□□□□ -1.17
CD44P16070 AC026254.2-201ENST00000475295 371 ntBASIC7.74□□□□□ -1.17
CD44P16070 ANXA2P1-201ENST00000505539 926 ntBASIC7.74□□□□□ -1.17
CD44P16070 AC060775.1-201ENST00000518241 520 ntBASIC7.74□□□□□ -1.17
CD44P16070 AK6P2-201ENST00000549020 471 ntBASIC7.74□□□□□ -1.17
CD44P16070 AL591767.3-201ENST00000554632 525 ntBASIC7.74□□□□□ -1.17
CD44P16070 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC7.74□□□□□ -1.17
CD44P16070 GLYATL1P2-202ENST00000588046 902 ntBASIC7.74□□□□□ -1.17
CD44P16070 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 MAPK10-344ENST00000641718 3746 ntBASIC7.74□□□□□ -1.17
CD44P16070 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms