Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.85□□□□□ -1.63
CFTRP13569 BX679664.1-201ENST00000434429 253 ntBASIC4.85□□□□□ -1.63
CFTRP13569 AC021205.1-201ENST00000468797 348 ntBASIC4.85□□□□□ -1.63
CFTRP13569 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CFTRP13569 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.85□□□□□ -1.63
CFTRP13569 AC011602.1-201ENST00000546484 331 ntBASIC4.85□□□□□ -1.63
CFTRP13569 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.85□□□□□ -1.63
CFTRP13569 AC027176.1-201ENST00000560204 514 ntBASIC4.85□□□□□ -1.63
CFTRP13569 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.84□□□□□ -1.63
CFTRP13569 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CFTRP13569 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.84□□□□□ -1.63
CFTRP13569 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.84□□□□□ -1.63
CFTRP13569 AC008413.1-201ENST00000511864 177 ntBASIC4.84□□□□□ -1.63
CFTRP13569 RNA5SP148-201ENST00000516527 94 ntBASIC4.84□□□□□ -1.63
CFTRP13569 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.84□□□□□ -1.63
CFTRP13569 KC877982.1-201ENST00000602313 470 ntBASIC4.84□□□□□ -1.63
CFTRP13569 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CFTRP13569 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
CFTRP13569 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CFTRP13569 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CFTRP13569 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CFTRP13569 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.83□□□□□ -1.64
CFTRP13569 SEPT7P2-202ENST00000398921 823 ntBASIC4.83□□□□□ -1.64
CFTRP13569 RN7SKP192-201ENST00000411291 327 ntBASIC4.83□□□□□ -1.64
CFTRP13569 HMGN1P18-201ENST00000457642 277 ntBASIC4.83□□□□□ -1.64
CFTRP13569 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CFTRP13569 RNA5SP282-201ENST00000516355 108 ntBASIC4.83□□□□□ -1.64
CFTRP13569 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CFTRP13569 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CFTRP13569 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.82□□□□□ -1.64
CFTRP13569 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CFTRP13569 AL356057.3-201ENST00000402607 340 ntBASIC4.82□□□□□ -1.64
CFTRP13569 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.82□□□□□ -1.64
CFTRP13569 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.82□□□□□ -1.64
CFTRP13569 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CFTRP13569 SNORD53-201ENST00000579969 78 ntBASIC4.82□□□□□ -1.64
CFTRP13569 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
CFTRP13569 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CFTRP13569 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CFTRP13569 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CFTRP13569 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CFTRP13569 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.82□□□□□ -1.64
CFTRP13569 RPL7P10-201ENST00000417407 739 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.81□□□□□ -1.64
CFTRP13569 ZYG11AP1-201ENST00000430329 837 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.81□□□□□ -1.64
CFTRP13569 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.81□□□□□ -1.64
CFTRP13569 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.81□□□□□ -1.64
CFTRP13569 AC090525.1-201ENST00000479116 478 ntBASIC4.81□□□□□ -1.64
CFTRP13569 ANXA2P1-201ENST00000505539 926 ntBASIC4.81□□□□□ -1.64
CFTRP13569 RNA5SP217-201ENST00000515959 91 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AP001646.1-201ENST00000527936 915 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.81□□□□□ -1.64
CFTRP13569 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.81□□□□□ -1.64
CFTRP13569 MIR4425-201ENST00000580572 84 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AL450472.3-201ENST00000615578 367 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AL356490.1-201ENST00000623079 479 ntBASIC4.81□□□□□ -1.64
CFTRP13569 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CFTRP13569 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.81□□□□□ -1.64
CFTRP13569 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CFTRP13569 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CFTRP13569 RPL7P26-201ENST00000333817 754 ntBASIC4.81□□□□□ -1.64
CFTRP13569 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CFTRP13569 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.81□□□□□ -1.64
CFTRP13569 AC104027.1-201ENST00000521887 300 ntBASIC4.81□□□□□ -1.64
CFTRP13569 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CFTRP13569 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.81□□□□□ -1.64
CFTRP13569 AL591516.1-201ENST00000611326 274 ntBASIC4.81□□□□□ -1.64
CFTRP13569 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.81□□□□□ -1.64
CFTRP13569 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CFTRP13569 AL049555.1-201ENST00000562834 1933 ntBASIC4.8□□□□□ -1.64
CFTRP13569 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CFTRP13569 TAB3P1-202ENST00000452645 1634 ntBASIC4.8□□□□□ -1.64
CFTRP13569 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CFTRP13569 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CFTRP13569 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CFTRP13569 RNA5SP293-201ENST00000410527 113 ntBASIC4.8□□□□□ -1.64
CFTRP13569 HMGB3P6-201ENST00000444896 598 ntBASIC4.8□□□□□ -1.64
CFTRP13569 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.8□□□□□ -1.64
CFTRP13569 AC126121.1-201ENST00000482313 553 ntBASIC4.8□□□□□ -1.64
CFTRP13569 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.8□□□□□ -1.64
CFTRP13569 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.8□□□□□ -1.64
CFTRP13569 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.8□□□□□ -1.64
CFTRP13569 AC098826.3-201ENST00000603823 466 ntBASIC4.8□□□□□ -1.64
CFTRP13569 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CFTRP13569 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CFTRP13569 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.79□□□□□ -1.64
CFTRP13569 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.79□□□□□ -1.64
CFTRP13569 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CFTRP13569 ATF1P1-201ENST00000406040 927 ntBASIC4.79□□□□□ -1.64
CFTRP13569 CBX1P4-201ENST00000439415 457 ntBASIC4.79□□□□□ -1.64
CFTRP13569 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.79□□□□□ -1.64
CFTRP13569 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.79□□□□□ -1.64
CFTRP13569 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.79□□□□□ -1.64
CFTRP13569 IGKV3-31-201ENST00000523109 329 ntBASIC4.79□□□□□ -1.64
CFTRP13569 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.79□□□□□ -1.64
CFTRP13569 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.79□□□□□ -1.64
CFTRP13569 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.79□□□□□ -1.64
CFTRP13569 RMST_8.1-201ENST00000610287 165 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms