Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL672167.1-206ENST00000356293 943 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 Y_RNA.201-201ENST00000364052 96 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RNU1-132P-201ENST00000364300 164 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RNA5SP515-201ENST00000364570 118 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RNA5SP366-201ENST00000365454 123 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 ARF4P3-201ENST00000397387 509 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 SSXP10-201ENST00000402595 565 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC004987.3-201ENST00000413879 771 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC073136.2-201ENST00000417282 849 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 OR2AH1P-201ENST00000425717 928 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 ZYG11AP1-201ENST00000430329 837 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 MED14P1-201ENST00000430517 648 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 KCTD10P1-201ENST00000434203 625 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPL12P18-201ENST00000437175 325 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 MTND4P6-201ENST00000438297 472 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPL23AP52-201ENST00000439311 478 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 TAF9P1-201ENST00000445421 515 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL360221.1-201ENST00000445989 335 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL591623.2-201ENST00000449978 222 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPL36AP33-201ENST00000450395 310 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC104073.1-201ENST00000451988 151 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 TAF9P2-201ENST00000454958 515 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 TRBV26-201ENST00000456572 344 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPL30P9-201ENST00000465586 330 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPS20P21-201ENST00000466859 343 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC090013.1-201ENST00000485147 480 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC091167.1-201ENST00000492017 396 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 TMEM251P1-201ENST00000503717 318 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 PARP4P3-201ENST00000510265 317 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC026402.1-201ENST00000513642 170 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC104057.1-201ENST00000515547 497 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RPL12P22-201ENST00000519073 490 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 HIGD1AP10-201ENST00000527837 282 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 TRAV8-5-201ENST00000537369 341 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC068993.1-201ENST00000546724 589 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC007115.1-201ENST00000546853 234 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC023161.2-201ENST00000551218 780 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC007224.1-201ENST00000564410 144 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RN7SL176P-201ENST00000580352 264 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC091178.1-203ENST00000584586 279 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC090181.2-201ENST00000602975 672 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 U73023.1-201ENST00000603134 700 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC004987.4-201ENST00000603383 338 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 COX6CP4-201ENST00000605798 228 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL158063.1-201ENST00000615349 536 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 uc_338.13-201ENST00000618243 179 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 MIR6891-201ENST00000618788 93 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AC018816.2-201ENST00000621460 353 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 MIR3653-201ENST00000625572 110 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 NXPH1-205ENST00000602349 1953 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 AL731532.2-201ENST00000623542 1953 ntBASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.59□□□□□ -1.83
IGHV4-38-2P0DP08 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 AC091046.3-201ENST00000631455 1574 ntBASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
IGHV4-38-2P0DP08 ERCC6-202ENST00000374127 1782 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 Y_RNA.126-201ENST00000363382 111 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 RNU6-723P-201ENST00000383973 107 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 MIR3065-201ENST00000390137 79 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 AL512430.2-201ENST00000406786 339 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 SNORA11-201ENST00000408789 128 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 RPS20P14-201ENST00000412545 360 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 OR8G2P-201ENST00000412796 908 ntBASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.58□□□□□ -1.84
IGHV4-38-2P0DP08 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms