Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CCNB2P1-201ENST00000399411 1150 ntBASIC3.46□□□□□ -1.86
APOEP02649 AC004987.3-201ENST00000413879 771 ntBASIC3.46□□□□□ -1.86
APOEP02649 AL158156.1-201ENST00000422509 473 ntBASIC3.46□□□□□ -1.86
APOEP02649 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.46□□□□□ -1.86
APOEP02649 FAR1P1-201ENST00000427163 934 ntBASIC3.46□□□□□ -1.86
APOEP02649 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.46□□□□□ -1.86
APOEP02649 BUD31P2-201ENST00000449374 300 ntBASIC3.46□□□□□ -1.86
APOEP02649 HMGN1P18-201ENST00000457642 277 ntBASIC3.46□□□□□ -1.86
APOEP02649 RPS4XP10-201ENST00000465034 731 ntBASIC3.46□□□□□ -1.86
APOEP02649 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
APOEP02649 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
APOEP02649 RPL7P38-201ENST00000488396 739 ntBASIC3.46□□□□□ -1.86
APOEP02649 AL358832.1-201ENST00000497800 389 ntBASIC3.46□□□□□ -1.86
APOEP02649 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.46□□□□□ -1.86
APOEP02649 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.46□□□□□ -1.86
APOEP02649 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.46□□□□□ -1.86
APOEP02649 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.46□□□□□ -1.86
APOEP02649 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
APOEP02649 AC005476.1-201ENST00000554427 397 ntBASIC3.46□□□□□ -1.86
APOEP02649 AL162713.1-201ENST00000604480 262 ntBASIC3.46□□□□□ -1.86
APOEP02649 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
APOEP02649 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.46□□□□□ -1.86
APOEP02649 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
APOEP02649 RNU6-666P-201ENST00000363499 107 ntBASIC3.45□□□□□ -1.86
APOEP02649 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
APOEP02649 PRELID3BP11-201ENST00000414230 479 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC012065.2-201ENST00000421295 375 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.45□□□□□ -1.86
APOEP02649 RPL23AP69-201ENST00000431134 458 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.45□□□□□ -1.86
APOEP02649 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.45□□□□□ -1.86
APOEP02649 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.45□□□□□ -1.86
APOEP02649 RPL31P20-201ENST00000449593 360 ntBASIC3.45□□□□□ -1.86
APOEP02649 SLC31A1P1-201ENST00000451221 567 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.45□□□□□ -1.86
APOEP02649 AC092754.2-201ENST00000463506 460 ntBASIC3.45□□□□□ -1.86
APOEP02649 RPL7P5-201ENST00000471472 736 ntBASIC3.45□□□□□ -1.86
APOEP02649 RPL30P11-201ENST00000495304 339 ntBASIC3.45□□□□□ -1.86
APOEP02649 HSPD1P15-201ENST00000505573 1122 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC110794.1-201ENST00000505816 425 ntBASIC3.45□□□□□ -1.86
APOEP02649 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC006518.1-201ENST00000541449 943 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC010198.2-201ENST00000550612 259 ntBASIC3.45□□□□□ -1.86
APOEP02649 OR4H12P-201ENST00000556269 907 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC092868.3-201ENST00000560515 784 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC073657.2-201ENST00000605661 303 ntBASIC3.45□□□□□ -1.86
APOEP02649 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
APOEP02649 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.45□□□□□ -1.86
APOEP02649 AC007342.8-201ENST00000623278 678 ntBASIC3.45□□□□□ -1.86
APOEP02649 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.45□□□□□ -1.86
APOEP02649 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
APOEP02649 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOEP02649 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOEP02649 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOEP02649 DYNLT3P1-201ENST00000378574 347 ntBASIC3.44□□□□□ -1.86
APOEP02649 RNA5SP107-201ENST00000411358 122 ntBASIC3.44□□□□□ -1.86
APOEP02649 AC012498.1-201ENST00000424037 437 ntBASIC3.44□□□□□ -1.86
APOEP02649 AC005326.1-201ENST00000429197 123 ntBASIC3.44□□□□□ -1.86
APOEP02649 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.44□□□□□ -1.86
APOEP02649 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 RPL5P23-201ENST00000496040 868 ntBASIC3.44□□□□□ -1.86
APOEP02649 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.44□□□□□ -1.86
APOEP02649 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.44□□□□□ -1.86
APOEP02649 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.44□□□□□ -1.86
APOEP02649 AP005212.4-201ENST00000614206 710 ntBASIC3.44□□□□□ -1.86
APOEP02649 AL157817.1-201ENST00000614264 790 ntBASIC3.44□□□□□ -1.86
APOEP02649 AC015726.3-201ENST00000624501 418 ntBASIC3.44□□□□□ -1.86
APOEP02649 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOEP02649 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.44□□□□□ -1.86
APOEP02649 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOEP02649 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOEP02649 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOEP02649 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.43□□□□□ -1.86
APOEP02649 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
APOEP02649 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOEP02649 AP000567.1-201ENST00000406413 156 ntBASIC3.43□□□□□ -1.86
APOEP02649 HMGN1P24-201ENST00000412282 298 ntBASIC3.43□□□□□ -1.86
APOEP02649 AC004022.2-201ENST00000413824 193 ntBASIC3.43□□□□□ -1.86
APOEP02649 ELOCP6-201ENST00000429066 328 ntBASIC3.43□□□□□ -1.86
APOEP02649 ELOCP11-201ENST00000436690 332 ntBASIC3.43□□□□□ -1.86
APOEP02649 AL353898.1-201ENST00000444055 238 ntBASIC3.43□□□□□ -1.86
APOEP02649 ELOCP16-201ENST00000444494 332 ntBASIC3.43□□□□□ -1.86
APOEP02649 AC104978.1-201ENST00000449387 391 ntBASIC3.43□□□□□ -1.86
APOEP02649 ELOCP12-201ENST00000458706 328 ntBASIC3.43□□□□□ -1.86
APOEP02649 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.43□□□□□ -1.86
APOEP02649 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.43□□□□□ -1.86
APOEP02649 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.43□□□□□ -1.86
APOEP02649 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
APOEP02649 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.43□□□□□ -1.86
APOEP02649 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.43□□□□□ -1.86
APOEP02649 uc_338.1-201ENST00000612113 180 ntBASIC3.43□□□□□ -1.86
APOEP02649 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms