Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA3DO95025 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 HMGB1P45-201ENST00000435986 653 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 RPS4XP2-201ENST00000458402 793 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AC087312.1-201ENST00000471411 480 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AC004923.2-201ENST00000529649 369 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AC103843.2-201ENST00000530523 682 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AP002812.4-201ENST00000532139 286 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AC006518.1-201ENST00000541449 943 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 MIR4474-201ENST00000579189 78 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 CBX3P2-202ENST00000583365 535 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA3DO95025 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AL731566.2-201ENST00000618971 317 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 AC032011.1-201ENST00000611703 1549 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SEMA3DO95025 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA3DO95025 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA3DO95025 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.31□□□□□ -1.88
SEMA3DO95025 MTND4P34-201ENST00000572715 1371 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RNA5SP124-201ENST00000362739 110 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 SNORA7.2-201ENST00000364446 145 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA3DO95025 AL359837.1-201ENST00000381357 287 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA3DO95025 EIF5P1-201ENST00000400019 1231 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RSL24D1P1-201ENST00000404972 493 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RNU6-55P-201ENST00000411092 107 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RNU6-954P-201ENST00000411355 107 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 GTF2IP23-201ENST00000423746 351 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 CR848007.2-201ENST00000424918 787 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 FO393419.3-201ENST00000428741 282 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 MTND4LP14-201ENST00000429447 288 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 ELOCP11-201ENST00000436690 332 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 ELOCP16-201ENST00000444494 332 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 TPTE2P6-202ENST00000445572 1007 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AL133547.1-201ENST00000448546 220 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RPL29P29-201ENST00000448725 423 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AL513343.1-201ENST00000451818 792 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC012181.1-201ENST00000479895 423 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC021205.2-201ENST00000480069 347 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
SEMA3DO95025 HMGB3P15-201ENST00000507326 574 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 MED28P5-201ENST00000528254 438 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 MTND4LP24-201ENST00000572277 291 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA3DO95025 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA3DO95025 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
SEMA3DO95025 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 AL365440.1-201ENST00000436135 2167 ntBASIC3.31□□□□□ -1.88
SEMA3DO95025 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
SEMA3DO95025 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SEMA3DO95025 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 MIR142-201ENST00000384835 87 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.3□□□□□ -1.88
SEMA3DO95025 SYF2P2-201ENST00000417620 583 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.3□□□□□ -1.88
SEMA3DO95025 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEMA3DO95025 MTND4P24-201ENST00000424002 397 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC092017.2-201ENST00000427600 362 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC018644.1-201ENST00000429934 551 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC023347.2-201ENST00000433994 462 ntBASIC3.3□□□□□ -1.88
SEMA3DO95025 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms