Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC004520.1-201ENST00000608362 1413 ntBASIC1.32□□□□□ -2.2
USH2AO75445 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 HSPA8P1-201ENST00000425843 1833 ntBASIC1.32□□□□□ -2.2
USH2AO75445 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
USH2AO75445 NFIB-202ENST00000380924 840 ntTSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 RNA5SP21-201ENST00000410917 96 ntBASIC1.32□□□□□ -2.2
USH2AO75445 PPP1R11P1-201ENST00000486095 376 ntBASIC1.32□□□□□ -2.2
USH2AO75445 RN7SKP282-201ENST00000516824 299 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC1.32□□□□□ -2.2
USH2AO75445 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.6-201ENST00000603753 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.11-201ENST00000604059 253 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.10-201ENST00000604330 253 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AC008162.1-201ENST00000604718 254 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.1-201ENST00000604752 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.2-201ENST00000604983 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.5-201ENST00000605253 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.4-201ENST00000605279 254 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.12-201ENST00000605291 253 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.8-201ENST00000605353 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.9-201ENST00000605428 253 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL670379.7-201ENST00000605823 252 ntBASIC1.32□□□□□ -2.2
USH2AO75445 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 AL356489.2-201ENST00000566968 3528 ntBASIC1.32□□□□□ -2.2
USH2AO75445 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 Z95114.1-201ENST00000624264 14574 ntBASIC1.32□□□□□ -2.2
USH2AO75445 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
USH2AO75445 RN7SKP44-201ENST00000363602 316 ntBASIC1.32□□□□□ -2.2
USH2AO75445 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 RNU2-52P-201ENST00000410680 190 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.32□□□□□ -2.2
USH2AO75445 AL591704.1-201ENST00000432574 275 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL451074.3-201ENST00000437709 472 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 NR1H5P-201ENST00000452683 1377 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
USH2AO75445 RNU6-618P-201ENST00000363518 112 ntBASIC1.32□□□□□ -2.2
USH2AO75445 RNU11-201ENST00000387069 134 ntBASIC1.32□□□□□ -2.2
USH2AO75445 JKAMPP1-201ENST00000413804 919 ntBASIC1.32□□□□□ -2.2
USH2AO75445 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC1.32□□□□□ -2.2
USH2AO75445 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 AL133271.1-201ENST00000538229 291 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL360012.1-201ENST00000602813 131 ntBASIC1.32□□□□□ -2.2
USH2AO75445 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 AC006020.1-201ENST00000420179 1854 ntBASIC1.32□□□□□ -2.2
USH2AO75445 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 RNU4-53P-201ENST00000410828 140 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.32□□□□□ -2.2
USH2AO75445 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.32□□□□□ -2.2
USH2AO75445 OR4U1P-201ENST00000554958 912 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AC096947.1-201ENST00000603233 470 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC1.32□□□□□ -2.2
USH2AO75445 AC004696.1-201ENST00000614345 607 ntBASIC1.32□□□□□ -2.2
USH2AO75445 AC022509.4-201ENST00000621404 572 ntBASIC1.32□□□□□ -2.2
USH2AO75445 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 AL109809.4-201ENST00000603520 2185 ntBASIC1.31□□□□□ -2.2
USH2AO75445 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 SNORD15B-201ENST00000384714 146 ntBASIC1.31□□□□□ -2.2
USH2AO75445 MIR613-201ENST00000385248 95 ntBASIC1.31□□□□□ -2.2
USH2AO75445 MIR1271-201ENST00000408537 86 ntBASIC1.31□□□□□ -2.2
USH2AO75445 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 AC005008.1-201ENST00000456151 612 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC083906.5-201ENST00000503722 328 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC138938.1-201ENST00000515431 782 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 WISP1-OT1-201ENST00000602893 642 ntBASIC1.31□□□□□ -2.2
USH2AO75445 MRPS35P3-201ENST00000603189 709 ntBASIC1.31□□□□□ -2.2
USH2AO75445 AL732372.2-225ENST00000642124 456 ntBASIC1.31□□□□□ -2.2
USH2AO75445 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC1.31□□□□□ -2.2
USH2AO75445 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
USH2AO75445 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 NPM1P37-201ENST00000403105 874 ntBASIC1.31□□□□□ -2.2
USH2AO75445 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
USH2AO75445 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC1.31□□□□□ -2.2
USH2AO75445 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.31□□□□□ -2.2
USH2AO75445 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.31□□□□□ -2.2
USH2AO75445 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.31□□□□□ -2.2
USH2AO75445 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms