Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL6P5-201ENST00000445678 828 ntBASIC3.12□□□□□ -1.91
SGCEO43556 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCEO43556 HMGN2P16-201ENST00000456802 261 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AC023598.1-201ENST00000472521 361 ntBASIC3.12□□□□□ -1.91
SGCEO43556 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SGCEO43556 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SGCEO43556 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCEO43556 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.12□□□□□ -1.91
SGCEO43556 HMGB1P46-201ENST00000520062 610 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCEO43556 MTCO1P49-201ENST00000523429 802 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.12□□□□□ -1.91
SGCEO43556 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.12□□□□□ -1.91
SGCEO43556 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.12□□□□□ -1.91
SGCEO43556 IGHV3-29-201ENST00000604817 344 ntBASIC3.12□□□□□ -1.91
SGCEO43556 AC119674.1-207ENST00000641355 633 ntBASIC3.12□□□□□ -1.91
SGCEO43556 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCEO43556 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCEO43556 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCEO43556 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCEO43556 PABPC1P7-201ENST00000413177 1513 ntBASIC3.11□□□□□ -1.91
SGCEO43556 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
SGCEO43556 RNU1-64P-201ENST00000365443 163 ntBASIC3.11□□□□□ -1.91
SGCEO43556 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCEO43556 RPL21P17-201ENST00000397467 475 ntBASIC3.11□□□□□ -1.91
SGCEO43556 PRRC2CP1-201ENST00000404428 159 ntBASIC3.11□□□□□ -1.91
SGCEO43556 RN7SKP202-201ENST00000410439 330 ntBASIC3.11□□□□□ -1.91
SGCEO43556 MTND4P22-201ENST00000413116 1169 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 AL445584.1-201ENST00000431451 330 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AL035246.1-201ENST00000433554 1255 ntBASIC3.11□□□□□ -1.91
SGCEO43556 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SGCEO43556 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC074367.1-201ENST00000438685 1125 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCEO43556 AC069540.1-201ENST00000446320 988 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC092685.1-201ENST00000447960 1243 ntBASIC3.11□□□□□ -1.91
SGCEO43556 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
SGCEO43556 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
SGCEO43556 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SGCEO43556 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.11□□□□□ -1.91
SGCEO43556 AC084357.1-201ENST00000473404 255 ntBASIC3.11□□□□□ -1.91
SGCEO43556 ACTR3P3-201ENST00000480448 893 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC108860.1-201ENST00000484521 383 ntBASIC3.11□□□□□ -1.91
SGCEO43556 MTND3P6-201ENST00000485242 339 ntBASIC3.11□□□□□ -1.91
SGCEO43556 HMGB1P38-201ENST00000490557 577 ntBASIC3.11□□□□□ -1.91
SGCEO43556 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
SGCEO43556 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 AC110768.1-201ENST00000509222 400 ntBASIC3.11□□□□□ -1.91
SGCEO43556 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.11□□□□□ -1.91
SGCEO43556 RN7SKP18-201ENST00000516005 275 ntBASIC3.11□□□□□ -1.91
SGCEO43556 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCEO43556 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SGCEO43556 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCEO43556 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCEO43556 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.11□□□□□ -1.91
SGCEO43556 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 BNIP3P5-201ENST00000562290 498 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC106785.1-201ENST00000565935 262 ntBASIC3.11□□□□□ -1.91
SGCEO43556 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCEO43556 BNIP3P38-201ENST00000601117 544 ntBASIC3.11□□□□□ -1.91
SGCEO43556 YWHAQP7-201ENST00000603536 658 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AC010591.1-201ENST00000603941 649 ntBASIC3.11□□□□□ -1.91
SGCEO43556 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCEO43556 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCEO43556 AC007823.1-201ENST00000569932 1566 ntBASIC3.11□□□□□ -1.91
SGCEO43556 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCEO43556 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SGCEO43556 MTND4P34-201ENST00000572715 1371 ntBASIC3.11□□□□□ -1.91
SGCEO43556 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.11□□□□□ -1.91
SGCEO43556 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCEO43556 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SGCEO43556 AC117529.2-201ENST00000512159 2068 ntBASIC3.1□□□□□ -1.91
SGCEO43556 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SGCEO43556 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCEO43556 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SGCEO43556 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SGCEO43556 AL359837.1-201ENST00000381357 287 ntBASIC3.1□□□□□ -1.91
SGCEO43556 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SGCEO43556 AL136116.1-201ENST00000403591 381 ntBASIC3.1□□□□□ -1.91
SGCEO43556 Z86062.1-201ENST00000406773 777 ntBASIC3.1□□□□□ -1.91
SGCEO43556 RPL23AP47-201ENST00000408017 460 ntBASIC3.1□□□□□ -1.91
SGCEO43556 RNU6ATAC-201ENST00000408749 126 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.1□□□□□ -1.91
SGCEO43556 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
SGCEO43556 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCEO43556 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCEO43556 OSTCP5-201ENST00000425293 453 ntBASIC3.1□□□□□ -1.91
SGCEO43556 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
SGCEO43556 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
SGCEO43556 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.1□□□□□ -1.91
SGCEO43556 AC010401.1-201ENST00000463867 348 ntBASIC3.1□□□□□ -1.91
SGCEO43556 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC087312.1-201ENST00000471411 480 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms