Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ATF1P1-201ENST00000406040 927 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 RPL21P65-201ENST00000406094 466 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 RNU6-77P-201ENST00000410554 91 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RIPK2O43353 RPL31P12-201ENST00000422587 358 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 SDCBPP2-201ENST00000424643 885 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 FAR1P1-201ENST00000427163 934 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 NEK4P1-201ENST00000433383 879 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
RIPK2O43353 AL500527.1-201ENST00000448532 255 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 RPS29P33-201ENST00000456717 146 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.69□□□□□ -1.82
RIPK2O43353 RPS4XP2-201ENST00000458402 793 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AC089999.1-201ENST00000460336 374 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 RPL6P9-201ENST00000466502 859 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.69□□□□□ -1.82
RIPK2O43353 RPS27AP1-201ENST00000475545 471 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RIPK2O43353 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 SNORA76.2-201ENST00000517095 137 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 SNORA31.20-201ENST00000517111 133 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 RPL12P22-201ENST00000519073 490 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.69□□□□□ -1.82
RIPK2O43353 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.69□□□□□ -1.82
RIPK2O43353 AC104229.1-201ENST00000561364 255 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.69□□□□□ -1.82
RIPK2O43353 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
RIPK2O43353 MIR6500-201ENST00000622700 86 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AP000553.6-201ENST00000641242 118 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 AC021755.1-201ENST00000559747 1447 ntBASIC3.69□□□□□ -1.82
RIPK2O43353 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIPK2O43353 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 MTND5P31-201ENST00000419366 1374 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 PWAR6-201ENST00000552334 4618 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 SNORD56.4-201ENST00000363883 71 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 DEFB109C-201ENST00000382575 264 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 DEFB109B-201ENST00000382656 264 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RIPK2O43353 RPS4XP9-201ENST00000405151 780 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.68□□□□□ -1.82
RIPK2O43353 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 RNU4-65P-201ENST00000410473 140 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 RPL17P36-201ENST00000420302 549 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 AC006548.1-201ENST00000427470 102 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 BX679664.1-201ENST00000434429 253 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RIPK2O43353 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.68□□□□□ -1.82
RIPK2O43353 CEACAMP9-201ENST00000442990 513 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 RPS3AP46-201ENST00000448352 682 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 U3.44-201ENST00000458938 192 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 CYCSP20-201ENST00000473154 315 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AC012181.1-201ENST00000479895 423 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 RNU6-352P-201ENST00000516908 107 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AC087272.1-201ENST00000523624 533 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.68□□□□□ -1.82
RIPK2O43353 AC124293.1-201ENST00000530034 493 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.68□□□□□ -1.82
RIPK2O43353 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.68□□□□□ -1.82
RIPK2O43353 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 AC068722.2-201ENST00000618734 544 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 CR381572.1-201ENST00000625098 102 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.68□□□□□ -1.82
RIPK2O43353 AC073055.1-201ENST00000456901 1621 ntBASIC3.68□□□□□ -1.82
RIPK2O43353 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIPK2O43353 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RIPK2O43353 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIPK2O43353 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
RIPK2O43353 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIPK2O43353 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIPK2O43353 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIPK2O43353 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.67□□□□□ -1.82
RIPK2O43353 RNU6-339P-201ENST00000384310 107 ntBASIC3.67□□□□□ -1.82
RIPK2O43353 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIPK2O43353 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.67□□□□□ -1.82
RIPK2O43353 RAD23BP2-201ENST00000416003 1207 ntBASIC3.67□□□□□ -1.82
RIPK2O43353 MTCO3P12-201ENST00000416718 547 ntBASIC3.67□□□□□ -1.82
RIPK2O43353 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms