Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 RPL38P1-201ENST00000460914 211 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 RPL35P6-201ENST00000490024 372 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 POU5F1P7-201ENST00000508759 541 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC093809.1-201ENST00000509155 340 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC100784.1-201ENST00000522790 310 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 RPL21P5-201ENST00000554662 472 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AL359219.2-201ENST00000555184 348 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 RPS3AP23-202ENST00000574601 686 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 MIR4795-201ENST00000584182 89 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 BNIP3P10-201ENST00000605360 577 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC018695.5-201ENST00000605872 315 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AL136295.6-201ENST00000610486 658 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC135507.2-201ENST00000612443 309 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC000123.2-201ENST00000623124 461 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC019278.1-201ENST00000623516 479 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 BMS1P21-201ENST00000634565 365 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC073136.1-201ENST00000449426 2884 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AP000542.2-201ENST00000623199 6179 ntBASIC4.2□□□□□ -1.74
CGB1A6NKQ9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CGB1A6NKQ9 AC023421.1-201ENST00000590535 1785 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC011755.1-201ENST00000623763 2049 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC005294.1-201ENST00000355509 281 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 RNA5SP319-201ENST00000362768 119 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 RNY4P34-201ENST00000364779 95 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 RNU6-809P-201ENST00000384461 107 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 RNU6-878P-201ENST00000384578 110 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AL031985.1-201ENST00000392713 418 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 SNRPEP2-201ENST00000397592 279 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 RN7SKP16-201ENST00000410180 299 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 NANOGP6-201ENST00000429190 847 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 KCTD9P3-201ENST00000434597 1169 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC022364.2-201ENST00000457963 554 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC079168.1-201ENST00000458741 345 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 snoU13.7-201ENST00000459220 104 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC021660.1-201ENST00000465006 554 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC007182.2-201ENST00000489251 402 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 SNORA48.10-201ENST00000516965 160 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC013828.2-201ENST00000532487 235 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AP003034.1-201ENST00000534621 422 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 MIR3614-201ENST00000581261 86 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC008814.1-201ENST00000603797 406 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 AC104695.2-201ENST00000605056 775 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.812-201ENST00000610788 101 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.784-201ENST00000613803 101 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.787-201ENST00000616522 101 ntBASIC4.19□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.780-201ENST00000617336 101 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms