Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR4716-201ENST00000579628 84 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AP001981.2-201ENST00000603241 418 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC004987.4-201ENST00000603383 338 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 Mico1.1-201ENST00000611698 204 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MIR7844-201ENST00000616161 122 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC092184.1-201ENST00000625042 715 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 MTND5P28-201ENST00000438005 1594 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 SAMMSON-213ENST00000641336 1521 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC011978.2-201ENST00000569835 2054 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AL390237.1-201ENST00000404226 1415 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 DDX43P2-201ENST00000604753 1354 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SKP103-201ENST00000363848 320 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 Y_RNA.302-201ENST00000364997 102 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 Y_RNA.436-201ENST00000384097 102 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 MIR129-1-201ENST00000384972 72 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AL133384.1-201ENST00000412744 351 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AL953862.1-201ENST00000423016 168 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC234779.1-201ENST00000425910 285 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 RPL36P19-201ENST00000430744 301 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 ELOCP18-201ENST00000434209 337 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 MTCO2P16-201ENST00000436962 677 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 TAF9P1-201ENST00000445421 515 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 TAF9P2-201ENST00000454958 515 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 RPL5P30-201ENST00000465511 891 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC010301.1-201ENST00000473936 355 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC006517.1-201ENST00000480485 328 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 BNIP3P41-201ENST00000503774 571 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC111000.3-201ENST00000508057 576 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC006499.2-201ENST00000513470 337 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 Y_RNA.655-201ENST00000515919 96 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 OR5M7P-201ENST00000526140 972 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 HIGD1AP10-201ENST00000527837 282 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC007599.1-201ENST00000568688 1174 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC083899.3-201ENST00000603413 594 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC073114.1-201ENST00000612027 490 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC100827.5-201ENST00000615883 426 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC008443.7-201ENST00000622195 246 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC015908.5-201ENST00000623289 343 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 AC025031.4-201ENST00000621248 3271 ntBASIC4.31□□□□□ -1.72
TCRBV7S3A2A0A539 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RPL21P132-201ENST00000331267 462 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 MIR448-201ENST00000362131 111 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-984P-201ENST00000363236 109 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 MT-TH-201ENST00000387441 69 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP332-201ENST00000391063 115 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP36-201ENST00000410197 133 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RNU2-21P-201ENST00000410368 188 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC096632.1-201ENST00000427395 310 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms