Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-298P-201ENST00000390888 96 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL121978.1-201ENST00000402778 359 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 SFR1P1-201ENST00000403720 688 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 BTF3P8-201ENST00000414577 526 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 TCEA1P2-201ENST00000420496 906 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC092832.1-201ENST00000422934 400 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC096632.1-201ENST00000427395 310 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 HMGB3P22-202ENST00000451823 572 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 HMGB3P30-201ENST00000457863 606 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AP000873.1-201ENST00000463987 400 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC104982.1-201ENST00000478775 574 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC104417.1-201ENST00000523974 751 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 OR4C2P-201ENST00000530855 1064 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL360157.1-201ENST00000565962 87 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC074051.3-201ENST00000570238 358 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 RN7SL703P-201ENST00000578485 302 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC020914.4-201ENST00000597690 277 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL020997.3-201ENST00000602843 359 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 RPAP2P1-201ENST00000603626 1168 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AL109618.2-201ENST00000605527 211 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AP003392.5-201ENST00000607857 415 ntBASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4BQ9Y4P1 AC111188.2-201ENST00000529697 1387 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 RNU6-925P-201ENST00000384629 104 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL445189.1-201ENST00000405722 338 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 SFR1P2-201ENST00000421841 730 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 IFNNP1-201ENST00000429219 553 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL034418.1-201ENST00000448675 860 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC244505.3-201ENST00000454598 187 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 MTATP6P14-201ENST00000455189 673 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 RPL21P11-201ENST00000461458 483 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC010307.1-201ENST00000467206 836 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC078817.1-201ENST00000492623 435 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AP001207.1-201ENST00000524051 481 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 OR4A12P-201ENST00000530847 918 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 CBX3P5-201ENST00000552017 521 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC007424.1-203ENST00000554613 687 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC090330.1-201ENST00000588646 764 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC005255.1-201ENST00000593748 216 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL606490.9-201ENST00000603331 271 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL391834.2-201ENST00000609982 546 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 uc_338.32-201ENST00000615087 172 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 AL355578.1-201ENST00000607405 1328 ntBASIC3.68□□□□□ -1.82
ATG4BQ9Y4P1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms