Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AGGF1P8-201ENST00000562979 1000 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 VN1R79P-201ENST00000593540 513 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL020997.3-201ENST00000602843 359 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL009028.1-201ENST00000604895 802 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC013468.1-201ENST00000608680 598 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC018926.1-201ENST00000616335 435 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC091905.1-201ENST00000624400 311 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 MTND5P28-201ENST00000438005 1594 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 RNU6-444P-201ENST00000383988 108 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 RNU6-468P-201ENST00000384003 109 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 RNU6-213P-201ENST00000384051 104 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 MIR449B-201ENST00000384995 97 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC127526.1-201ENST00000417526 366 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC069157.1-201ENST00000421749 137 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 TBCAP1-201ENST00000436520 327 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 Z77249.1-201ENST00000444622 1175 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 RPS20P32-201ENST00000456044 356 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 RPL21P18-201ENST00000469899 480 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 PRDX3P4-201ENST00000470828 747 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 RPS17P11-201ENST00000474297 293 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC016550.1-201ENST00000505348 785 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 HIGD1AP3-201ENST00000515857 278 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 Vault.1-201ENST00000516474 102 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 CR383656.14-201ENST00000551951 406 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 MTCO1P40-201ENST00000574371 625 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 BPTFP1-201ENST00000579209 492 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 MIR3944-201ENST00000581277 108 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC112503.1-201ENST00000608436 391 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC244100.1-202ENST00000621554 382 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 AL121594.5-201ENST00000631724 573 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 AC068620.4-201ENST00000636730 1182 ntBASIC3.6□□□□□ -1.83
RNF6Q9Y252 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF6Q9Y252 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF6Q9Y252 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RNF6Q9Y252 TNPO1P3-201ENST00000436471 2662 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC106871.1-201ENST00000568324 3102 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 RNA5SP124-201ENST00000362739 110 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 HMGB3P19-201ENST00000403971 560 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC069218.2-201ENST00000411665 344 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 UBE2V1P9-201ENST00000414760 368 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AL050321.1-201ENST00000432363 400 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC083863.1-201ENST00000438811 231 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 OR9M1P-201ENST00000459641 921 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 ACTR3P3-201ENST00000480448 893 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC068305.1-201ENST00000497406 726 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC011352.3-201ENST00000505162 593 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 USP9YP5-201ENST00000511770 630 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 MTCO3P27-201ENST00000514397 196 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 PAICSP4-201ENST00000517543 1253 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AP003355.1-201ENST00000518956 587 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms