Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC083863.1-201ENST00000438811 231 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL356535.1-201ENST00000440335 398 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL158053.1-201ENST00000441503 453 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC146507.1-201ENST00000468335 354 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC087879.1-201ENST00000474343 374 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC109458.1-201ENST00000508858 316 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 TMEM248P1-201ENST00000510579 951 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC010342.1-201ENST00000514047 877 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 OR8I1P-201ENST00000529291 931 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC124293.1-201ENST00000530034 493 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AP000619.3-201ENST00000535634 1127 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 NIFKP8-201ENST00000560500 874 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 MIR4789-201ENST00000577469 82 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL009028.1-201ENST00000604895 802 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 RPL21P136-201ENST00000605378 396 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 HMGN2P28-201ENST00000606102 262 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL391261.4-201ENST00000616012 481 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC009093.8-201ENST00000641769 292 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC024560.2-201ENST00000507981 1497 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC066616.2-201ENST00000559334 1481 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 MTND5P3-201ENST00000438536 1800 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 SNORD3H-201ENST00000384486 214 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AL035423.1-201ENST00000420331 213 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AL159169.1-201ENST00000421119 127 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 ATP5HP2-201ENST00000433885 485 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AL590399.6-201ENST00000446396 307 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 HMGB3P22-202ENST00000451823 572 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AL133477.1-201ENST00000457472 514 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC078817.1-201ENST00000492623 435 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 RPL7P24-201ENST00000493052 752 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 RPL5P23-201ENST00000496040 868 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC098799.1-201ENST00000504752 800 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC026403.1-201ENST00000518938 295 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 OR4C2P-201ENST00000530855 1064 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC107016.1-201ENST00000550463 337 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC124283.4-201ENST00000581815 456 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC012314.7-201ENST00000619693 93 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC022079.2-201ENST00000619739 566 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 ZNF849P-201ENST00000594711 1566 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 AC011978.2-201ENST00000569835 2054 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 ELL2P4-201ENST00000446870 1376 ntBASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA1Q9UND3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 RNA5SP167-201ENST00000365461 116 ntBASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.49□□□□□ -1.85
NPIPA1Q9UND3 U1.1-201ENST00000384101 164 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms