Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC079741.1-201ENST00000321498 212 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 UBBP2-201ENST00000376781 231 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL031577.2-201ENST00000404133 280 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 RN7SKP266-201ENST00000410232 287 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 RNA5SP345-201ENST00000410646 108 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 COX5BP7-201ENST00000414780 274 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 QRSL1P2-201ENST00000418582 964 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 RPS12P5-201ENST00000423449 371 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC005154.2-201ENST00000438110 379 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL117351.1-201ENST00000438864 766 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 RNA5SP392-201ENST00000516905 112 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 OR6C7P-201ENST00000547875 934 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC133555.2-201ENST00000550213 292 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL049839.1-201ENST00000556151 657 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC011260.1-201ENST00000578420 472 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC022726.1-201ENST00000587475 207 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL390208.1-201ENST00000605885 644 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC090186.1-201ENST00000605991 572 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 OR6R2P-201ENST00000609216 300 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AL596245.1-201ENST00000618994 362 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC040168.1-201ENST00000623594 991 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 AC091925.2-201ENST00000625059 256 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 KARSP3-201ENST00000571212 1504 ntBASIC4.45□□□□□ -1.7
LRFN1Q9P244 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 RPL32P3-201ENST00000359025 275 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 RNU6-263P-201ENST00000363811 107 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 RNU6-777P-201ENST00000364265 104 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 RNU6-837P-201ENST00000391056 108 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 U3.30-201ENST00000391308 210 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 HSPD1P16-201ENST00000402302 394 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 CEACAMP8-201ENST00000413902 580 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC127526.1-201ENST00000417526 366 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL365338.1-201ENST00000422282 858 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC068287.1-201ENST00000430283 295 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 RPL7AP61-201ENST00000443410 636 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC002381.1-201ENST00000447049 280 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC090142.1-201ENST00000465776 462 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 HMGB1P25-201ENST00000468402 607 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 MTND3P7-201ENST00000474435 343 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC068587.1-201ENST00000483613 781 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 Y_RNA.719-201ENST00000517156 106 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC008694.2-201ENST00000517591 306 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms