Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 AC109329.2-201ENST00000519658 482 ntBASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 AL049874.4-201ENST00000557593 255 ntBASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 AC091903.1-201ENST00000624322 454 ntBASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 AC073869.7-201ENST00000640874 297 ntBASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 MTND4P10-201ENST00000446199 1363 ntBASIC3.97□□□□□ -1.77
PHRF1Q9P1Y6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PHRF1Q9P1Y6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
PHRF1Q9P1Y6 SPATA2P1-201ENST00000431223 2055 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AL356057.1-202ENST00000402263 756 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC017078.1-201ENST00000416146 368 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 NPM1P24-201ENST00000428039 894 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC092851.1-201ENST00000535964 478 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC124856.1-201ENST00000600819 896 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 PLCE1P1-201ENST00000622094 305 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 AC017002.4-201ENST00000604721 1525 ntBASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PHRF1Q9P1Y6 RNU2-52P-201ENST00000410680 190 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 MYL8P-204ENST00000431574 518 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC010095.1-201ENST00000443543 144 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 RPS17P11-201ENST00000474297 293 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 RPL31P13-201ENST00000484151 370 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC108078.3-201ENST00000502633 489 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC117522.3-201ENST00000507974 584 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 U3.42-201ENST00000408746 214 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 NPM1P11-201ENST00000417106 855 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 HMGN1P18-201ENST00000457642 277 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 RNU4-29P-201ENST00000515943 174 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC106734.1-201ENST00000568646 663 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AC099654.11-201ENST00000638857 294 ntBASIC3.95□□□□□ -1.78
PHRF1Q9P1Y6 AL049780.3-201ENST00000624612 1583 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AL592494.2-201ENST00000425455 1548 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 RNU1-75P-201ENST00000347264 129 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 MIR9-1-201ENST00000385198 89 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AC073508.1-201ENST00000428866 656 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 PPIAP17-201ENST00000438507 471 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 AC243829.7-201ENST00000633081 225 ntBASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHRF1Q9P1Y6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AL139039.1-201ENST00000401900 692 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AC002524.1-201ENST00000411687 547 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AC063976.3-201ENST00000426849 329 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 RAB28P3-201ENST00000448325 597 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AL513124.1-201ENST00000450410 614 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 FDX1P2-201ENST00000450769 375 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AC114967.1-201ENST00000504890 259 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AC114781.4-201ENST00000513707 639 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 MIR4435-1-201ENST00000582552 80 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.93□□□□□ -1.78
PHRF1Q9P1Y6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms