Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL359212.1-201ENST00000556608 614 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AL157394.1-201ENST00000562983 1224 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC090751.1-201ENST00000566966 267 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC022884.3-201ENST00000579571 248 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC108738.1-201ENST00000603703 237 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC015871.5-202ENST00000623252 701 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC021106.3-201ENST00000623925 531 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC026634.1-201ENST00000634369 198 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC046144.1-201ENST00000478559 1853 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC090017.1-201ENST00000548612 1779 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 ASNSP1-204ENST00000641977 1664 ntBASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PARPBPQ9NWS1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC119744.1-201ENST00000454746 1715 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 CCT4P2-201ENST00000233836 1548 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 OR5J1P-201ENST00000313544 939 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNU4-79P-201ENST00000362764 141 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 Y_RNA.58-201ENST00000362807 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 SNORA63-201ENST00000363450 132 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 Y_RNA.154-201ENST00000363624 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNY3P1-201ENST00000365085 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNU6-282P-201ENST00000365357 103 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNY3-201ENST00000365484 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 Y_RNA.419-201ENST00000384041 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 Y_RNA.490-201ENST00000384413 102 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNU6-908P-201ENST00000410160 94 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 SPA17P1-201ENST00000416656 452 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 PDCL2P1-201ENST00000419302 352 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 TAAR7P-201ENST00000436141 242 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ARPC3P1-201ENST00000437218 533 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNU6-420P-201ENST00000458780 107 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RN7SL189P-201ENST00000468631 289 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC007182.2-201ENST00000489251 402 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RN7SL346P-201ENST00000491561 294 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 HMGN1P13-201ENST00000505795 138 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC093809.1-201ENST00000509155 340 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RNA5SP216-201ENST00000516111 123 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AP003181.2-201ENST00000528941 181 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AP003072.1-201ENST00000531740 145 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AL162431.4-201ENST00000604674 411 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC011816.2-201ENST00000607089 556 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RMST_3.1-201ENST00000611651 109 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC090574.1-201ENST00000623186 233 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 ZNF652P1-201ENST00000442420 1309 ntBASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PARPBPQ9NWS1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms