Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.22□□□□□ -1.41
CUEDC1Q9NWM3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CUEDC1Q9NWM3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CUEDC1Q9NWM3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.21□□□□□ -1.41
CUEDC1Q9NWM3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.21□□□□□ -1.41
CUEDC1Q9NWM3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-472P-201ENST00000384299 107 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.496-201ENST00000384444 101 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SNORA75.6-201ENST00000391318 127 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 RN7SKP281-201ENST00000410472 352 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC099782.1-201ENST00000425889 474 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC115283.1-201ENST00000427353 400 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 PSMA6P3-201ENST00000428242 164 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC005019.1-201ENST00000436455 431 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 COX4I1P2-201ENST00000447446 547 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SNORD127-201ENST00000458892 86 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC112484.3-201ENST00000505910 329 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MTND4P7-201ENST00000523876 130 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC103843.2-201ENST00000530523 682 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 LSM6P2-201ENST00000552208 177 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 RPL21P12-201ENST00000559810 515 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MIR4716-201ENST00000579628 84 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MIR3146-201ENST00000580367 79 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 RN7SL475P-201ENST00000583379 298 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MAGOH2P-202ENST00000584384 429 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC012254.3-201ENST00000591183 2117 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC073046.2-201ENST00000604756 527 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC096772.1-201ENST00000609146 564 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 Z82243.1-201ENST00000609432 473 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 uc_338.31-201ENST00000615595 186 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MIR6721-201ENST00000617181 87 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MIR6864-201ENST00000617935 70 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SMG1P5-202ENST00000529428 4219 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SMG1P2-201ENST00000566127 4221 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC092724.1-201ENST00000624623 3397 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 AC007159.1-201ENST00000566529 4706 ntBASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CUEDC1Q9NWM3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL662795.2-201ENST00000624252 3706 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 HSPE1P11-201ENST00000339579 310 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-82P-201ENST00000363970 107 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RN7SKP78-201ENST00000364711 318 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 SNORA20.1-201ENST00000364790 130 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.378-201ENST00000365652 113 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RHOT1P2-201ENST00000366423 333 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-441P-201ENST00000384545 106 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL391417.1-201ENST00000404100 426 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 NDUFS5P1-201ENST00000405668 289 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 EIF4EP1-201ENST00000422311 642 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC092832.1-201ENST00000422934 400 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 PIGPP3-201ENST00000425307 415 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RPL36AP15-201ENST00000444514 266 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 GEMIN8P3-201ENST00000445417 720 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL590664.1-201ENST00000448065 339 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL049714.1-201ENST00000466686 347 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RPL7P43-201ENST00000478876 753 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms