Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC104619.4-201ENST00000510773 249 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RPL7L1P13-201ENST00000511702 739 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RN7SKP234-201ENST00000517173 224 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 OR4A12P-201ENST00000530847 918 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC091515.1-201ENST00000548110 679 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC011611.5-201ENST00000552477 578 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 SRGNP1-201ENST00000603392 451 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 BNIP3P4-201ENST00000604946 565 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC007179.3-201ENST00000604976 235 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC113194.1-201ENST00000606037 500 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 MIR6864-201ENST00000617935 70 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 MIR4278-201ENST00000636094 69 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 SNORA63.3-201ENST00000362682 132 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 RNA5SP189-201ENST00000364920 115 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 SNORA70E-201ENST00000384492 135 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MIR525-201ENST00000384978 85 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 PRRC2CP1-201ENST00000404428 159 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 HSPE1P26-201ENST00000405341 275 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AMD1P2-201ENST00000412936 992 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC004987.3-201ENST00000413879 771 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 TCEA1P2-201ENST00000420496 906 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 RPL23AP83-201ENST00000434984 473 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 HMGB1P45-201ENST00000435986 653 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 HMGB1P37-201ENST00000439613 609 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 GXYLT1P1-201ENST00000446657 490 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC008885.2-201ENST00000509506 930 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC141257.3-201ENST00000572906 215 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MIR3908-201ENST00000579798 126 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MIR3922-201ENST00000585192 84 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MTATP6P2-201ENST00000603319 678 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 BNIP3P19-201ENST00000605397 577 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC092574.1-201ENST00000609771 420 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC015967.1-201ENST00000619893 476 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 RNU6-156P-201ENST00000621869 107 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AC068880.4-201ENST00000623082 495 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
HPS4Q9NQG7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HPS4Q9NQG7 MTND5P3-201ENST00000438536 1800 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 GABPAP-201ENST00000419271 1356 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 LINC00561-201ENST00000565815 2738 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 MIR183-201ENST00000384958 110 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 RPL22P22-201ENST00000395439 379 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 RPL7P60-201ENST00000397636 735 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 ATP5HP2-201ENST00000433885 485 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC004865.1-201ENST00000442276 1003 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC005002.1-201ENST00000447458 540 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms