Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL136964.1-201ENST00000622038 2990 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 FAM35BP-202ENST00000497389 3337 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AL031121.1-201ENST00000406553 254 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AIMP1P1-201ENST00000418670 937 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 FTH1P6-201ENST00000430768 320 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 NDUFS5P3-201ENST00000450668 321 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 MIR2276-201ENST00000516886 89 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AC027807.1-201ENST00000559921 996 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 AC015849.2-201ENST00000605738 409 ntBASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KIAA1549Q9HCM3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 RN7SKP285-201ENST00000410137 318 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 MTND4LP13-201ENST00000425022 298 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 BX890604.2-201ENST00000427883 474 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 AP001992.1-205ENST00000462248 379 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 RPL27AP5-201ENST00000469428 449 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 HAUS1P1-201ENST00000505275 832 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 AC104027.1-201ENST00000521887 300 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 PSMA2P1-201ENST00000526365 646 ntBASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.78□□□□□ -1.96
KIAA1549Q9HCM3 SNORA11C-201ENST00000408532 129 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AL592148.1-201ENST00000413568 445 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 RNF19BPX-201ENST00000426224 625 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 HMGB3P11-201ENST00000440127 604 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AL831737.1-201ENST00000441288 271 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 RPL23AP62-201ENST00000463396 453 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC004801.2-202ENST00000463559 283 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 RPS17P11-201ENST00000474297 293 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 TRBV8-1-201ENST00000481590 279 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC098799.1-201ENST00000504752 800 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC068446.3-201ENST00000555285 382 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 MIR6852-201ENST00000621699 66 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 AC067852.7-201ENST00000623270 535 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 SRP72P2-201ENST00000344851 1979 ntBASIC2.78□□□□□ -1.97
KIAA1549Q9HCM3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AC096644.4-201ENST00000563417 2912 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 OR4K6P-201ENST00000416478 897 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 CACYBPP1-201ENST00000438592 684 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 MTND6P32-201ENST00000457611 483 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 FTH1P9-201ENST00000513251 355 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AL451007.1-201ENST00000595491 289 ntBASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KIAA1549Q9HCM3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 MTND5P24-201ENST00000438892 1767 ntBASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 RNU1-75P-201ENST00000347264 129 ntBASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 SNORA71.1-201ENST00000364523 117 ntBASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 SKINT1L-201ENST00000401057 817 ntBASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
KIAA1549Q9HCM3 GTF2IP23-201ENST00000423746 351 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms