Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL669831.4-202ENST00000590817 238 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AL353778.1-201ENST00000603149 408 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC008782.1-201ENST00000603386 430 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 BNIP3P11-201ENST00000603878 563 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC115286.1-201ENST00000604298 434 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AL133507.1-201ENST00000605269 557 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC005962.2-201ENST00000611427 652 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AL161616.1-201ENST00000611867 286 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AP003485.2-201ENST00000623636 610 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AP001784.1-201ENST00000624107 428 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC019226.2-201ENST00000625973 424 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC103706.2-201ENST00000638080 240 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 MTCO1P14-201ENST00000441695 1559 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
BRF2Q9HAW0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
BRF2Q9HAW0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
BRF2Q9HAW0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 SNORA58B-201ENST00000364259 136 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 RNU6-253P-201ENST00000384730 105 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AL049545.1-201ENST00000401856 572 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 RNA5SP56-201ENST00000410277 118 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 MIR1911-201ENST00000410783 80 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 VPS26BP1-201ENST00000417155 755 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC012065.2-201ENST00000421295 375 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 RBMY1KP-201ENST00000423480 476 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC073264.2-201ENST00000448886 166 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 ABCF2P2-201ENST00000450549 296 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 MTCO3P11-201ENST00000455103 774 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 RPS20P24-201ENST00000457473 361 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC109458.1-201ENST00000508858 316 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 XKRY-201ENST00000510392 1100 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 PPBPP1-201ENST00000510807 373 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC134698.5-201ENST00000519444 336 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 HSPA8P13-201ENST00000523715 472 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 DUXAP6-201ENST00000553858 601 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC025811.1-201ENST00000604312 472 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AL607023.1-201ENST00000620045 248 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 AC019278.1-201ENST00000623516 479 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 SGO1P2-201ENST00000429458 1589 ntBASIC4.21□□□□□ -1.74
BRF2Q9HAW0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.21□□□□□ -1.74
BRF2Q9HAW0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC079741.1-201ENST00000321498 212 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 SNORA4.1-201ENST00000364263 144 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 RNU6-821P-201ENST00000390995 107 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 ARF4P3-201ENST00000397387 509 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 HMGB1P17-201ENST00000403495 628 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL356131.1-201ENST00000405826 414 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC092832.1-201ENST00000422934 400 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms