Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MTCO1P40-201ENST00000574371 625 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AF131215.7-201ENST00000602443 707 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC096553.1-201ENST00000605169 829 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL353726.1-201ENST00000614041 1000 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC121761.2-201ENST00000617300 689 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC022140.2-201ENST00000623500 188 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 GTF2H2B-203ENST00000508065 1432 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 ZNF833P-201ENST00000424938 1494 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RHOT1P2-201ENST00000366423 333 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 SNORA26.8-201ENST00000391306 124 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RNU2-16P-201ENST00000410712 136 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC004552.1-201ENST00000419089 348 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC006960.1-201ENST00000419980 153 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 DPRXP1-201ENST00000426312 460 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RBMX2P4-201ENST00000441256 376 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RPS26P3-201ENST00000470205 348 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RPL23AP65-201ENST00000475608 468 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC090543.2-201ENST00000483963 348 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC004057.1-201ENST00000485827 348 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RN7SL691P-201ENST00000494487 301 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC092045.1-201ENST00000495716 1231 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC005178.1-201ENST00000508392 440 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LTV1P1-201ENST00000510683 1237 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 RNA5SP49-201ENST00000516450 115 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 HMGB1P23-201ENST00000518743 568 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 HIGD1AP10-201ENST00000527837 282 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 OR5BC1P-201ENST00000529327 739 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC124293.1-201ENST00000530034 493 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 OR8R1P-201ENST00000543943 764 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC091178.1-203ENST00000584586 279 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC090181.2-201ENST00000602975 672 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC105227.2-201ENST00000615075 605 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AL356274.1-201ENST00000617064 410 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 MIR8059-201ENST00000620427 81 ntBASIC4.5□□□□□ -1.69
EBF3Q9H4W6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EBF3Q9H4W6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL133243.3-201ENST00000617415 3004 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC087190.4-201ENST00000574616 8334 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms