Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC006557.5-201ENST00000603126 811 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 MIR7153-201ENST00000637758 57 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AL356274.2-201ENST00000624379 3752 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC017071.1-201ENST00000564407 2204 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC093010.3-201ENST00000570269 15214 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 NACA3P-201ENST00000359690 648 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 MIR1289-1-201ENST00000408836 144 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 RN7SKP284-201ENST00000411002 343 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 RPL5P23-201ENST00000496040 868 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC108078.3-201ENST00000502633 489 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 FCF1P8-201ENST00000510322 597 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.95□□□□□ -1.78
UPF3BQ9BZI7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AL353746.1-201ENST00000566293 6881 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC096656.1-201ENST00000623826 1364 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 RNU1-33P-201ENST00000364249 162 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 RNA5SP107-201ENST00000411358 122 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 HSFY4P-201ENST00000415994 1181 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC005019.1-201ENST00000436455 431 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AL591503.2-201ENST00000442314 1005 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC010468.1-201ENST00000461022 817 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC078785.3-201ENST00000476607 425 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC092868.3-201ENST00000560515 784 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AC010680.4-201ENST00000605334 543 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AL365400.2-201ENST00000605604 902 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 AL354950.1-201ENST00000614150 568 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 U6.98-201ENST00000637157 84 ntBASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UPF3BQ9BZI7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL021368.2-201ENST00000606125 5352 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC138393.1-206ENST00000540997 1886 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 RNU6-1251P-201ENST00000364502 107 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 OR6K3-202ENST00000368146 996 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 SNORD65-201ENST00000391079 73 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 RN7SKP111-201ENST00000410349 271 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL024507.1-201ENST00000412741 274 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 USP9YP36-201ENST00000424581 829 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 USP9YP31-201ENST00000431405 881 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 MTCYBP29-201ENST00000436327 1006 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 TXNP1-201ENST00000441872 371 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AP000893.1-201ENST00000474462 794 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 TMED11P-201ENST00000479478 690 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AP001086.1-201ENST00000494882 321 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 OR5H3P-201ENST00000502817 919 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 RNU1-143P-201ENST00000516296 146 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC004024.1-201ENST00000549244 247 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC015917.1-201ENST00000579654 510 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL137843.1-201ENST00000605078 385 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 YPEL5P2-201ENST00000605553 359 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 U1.23-201ENST00000610293 146 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 RNU1-68P-201ENST00000615382 146 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms