Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC112206.4-201ENST00000515142 405 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC067904.2-201ENST00000517322 1283 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AP003049.1-201ENST00000529418 457 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 OR4R2P-201ENST00000530815 597 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC087888.1-201ENST00000550884 1254 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL136520.1-202ENST00000555494 763 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC006116.10-201ENST00000591836 581 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC005776.1-201ENST00000603164 290 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC010591.1-201ENST00000603941 649 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 HMGB1P51-201ENST00000605166 638 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC016542.1-201ENST00000608259 493 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL391497.1-201ENST00000608671 547 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC084036.1-201ENST00000609190 508 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC096577.2-201ENST00000611455 153 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC015967.1-201ENST00000619893 476 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AP003072.4-201ENST00000624580 310 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC080188.3-201ENST00000624842 748 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 MIR4278-201ENST00000636094 69 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL365440.1-201ENST00000436135 2167 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 SNORA5A-201ENST00000384111 134 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 SNORA11.2-201ENST00000408318 127 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RN7SKP222-201ENST00000410651 315 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC093578.1-201ENST00000415219 368 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC007390.1-201ENST00000415722 356 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC013410.2-201ENST00000422627 201 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL049610.1-201ENST00000423374 372 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RPS6P14-201ENST00000425165 719 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RPL23AP82-202ENST00000427528 469 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RPL6P9-201ENST00000466502 859 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RPL5P23-201ENST00000496040 868 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 CKS1BP1-201ENST00000555221 240 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RPL21P12-201ENST00000559810 515 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 MTND4LP25-201ENST00000570218 163 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL450270.1-201ENST00000606160 391 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC012213.4-201ENST00000606457 354 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 U1.23-201ENST00000610293 146 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 RNU1-68P-201ENST00000615382 146 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AC012314.7-201ENST00000619693 93 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 U1.39-201ENST00000621562 146 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 AL391262.2-201ENST00000622466 494 ntBASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RSPO3Q9BXY4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 USP8P1-201ENST00000494673 3183 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC004972.1-201ENST00000623934 2209 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 RNU4-35P-201ENST00000362588 141 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 MIR491-201ENST00000384877 84 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC097262.1-201ENST00000452559 548 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC087312.1-201ENST00000471411 480 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms