Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC009948.4-201ENST00000604692 675 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AL356218.2-201ENST00000605264 187 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AL365400.2-201ENST00000605604 902 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC106052.1-201ENST00000608029 497 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AP000894.4-201ENST00000610185 483 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC243654.2-201ENST00000612843 443 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC123767.1-202ENST00000620407 817 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AP000770.2-201ENST00000623694 100 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC092608.3-201ENST00000625017 386 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AP001002.2-201ENST00000625137 386 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC017104.5-201ENST00000637647 639 ntBASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC28BQ9BUN5 AC000367.1-201ENST00000452711 1766 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC022031.1-201ENST00000585985 2593 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC139713.2-214ENST00000642059 1811 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-398P-201ENST00000384143 109 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MIR124-3-201ENST00000384866 87 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RN7SKP278-201ENST00000410504 342 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RPS7P13-201ENST00000413955 498 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RPL23AP38-201ENST00000423801 469 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 COX6CP15-201ENST00000426313 211 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 DNAJC19P7-201ENST00000428811 344 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 ELOCP11-201ENST00000436690 332 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 SNORA71B-202ENST00000439232 272 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RPS7P5-201ENST00000441482 581 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 ELOCP16-201ENST00000444494 332 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MTCYBP42-201ENST00000444653 1130 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC005002.1-201ENST00000447458 540 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MTND2P8-201ENST00000450555 1025 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 DNAJC19P8-201ENST00000452887 259 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC092185.1-201ENST00000491371 97 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC113420.1-201ENST00000507903 571 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 RAC1P2-201ENST00000511164 579 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 IGKV2-36-201ENST00000519999 223 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 COX6B1P6-201ENST00000522347 255 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC022790.1-201ENST00000522872 204 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 MTCO1P40-201ENST00000574371 625 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC007687.1-201ENST00000602704 304 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 VN1R74P-201ENST00000613259 503 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 OR1S1-201ENST00000624470 978 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AL109659.3-201ENST00000624985 950 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 DCAF13P3-201ENST00000561147 1334 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 AC104446.1-201ENST00000613728 1321 ntBASIC3.68□□□□□ -1.82
CCDC28BQ9BUN5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 Y_RNA.578-201ENST00000390903 88 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-77P-201ENST00000410554 91 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 BTF3P8-201ENST00000414577 526 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AL449283.1-202ENST00000418249 604 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 NPM1P24-201ENST00000428039 894 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AL356276.2-201ENST00000435919 558 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 TBCAP1-201ENST00000436520 327 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 HMGB3P6-201ENST00000444896 598 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 BX248409.1-201ENST00000455497 255 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RPS23P7-201ENST00000466210 444 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC091959.2-201ENST00000477363 321 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RPS4XP22-201ENST00000480755 780 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RPS3AP6-201ENST00000484430 795 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC110768.1-201ENST00000509222 400 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms