Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP88Q99567 AC233702.9-201ENST00000581528 203 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 VN1R92P-201ENST00000598511 928 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 AC091979.2-201ENST00000607514 214 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP88Q99567 AL159169.3-201ENST00000608871 561 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 MIR6891-201ENST00000618788 93 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP88Q99567 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 AC006065.6-201ENST00000625201 545 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 AC068724.3-201ENST00000625906 87 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 AC127502.3-201ENST00000636170 1206 ntBASIC5.19□□□□□ -1.58
NUP88Q99567 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP88Q99567 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP88Q99567 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP88Q99567 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUP88Q99567 ELL2P4-201ENST00000446870 1376 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 OR5P1P-201ENST00000299512 925 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 RNU6-1243P-201ENST00000364028 107 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 MIR195-201ENST00000385194 87 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 AL583835.1-201ENST00000399570 407 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 HSFY4P-201ENST00000415994 1181 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 MTND1P20-201ENST00000430341 950 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 NUTF2P3-201ENST00000448540 384 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 AC009961.3-201ENST00000449832 765 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 ARPC3P2-201ENST00000457786 533 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC041039.1-201ENST00000485656 536 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP88Q99567 MTND5P13-201ENST00000513046 1079 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 RNU6-150P-201ENST00000516237 95 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 RN7SKP21-201ENST00000516503 220 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 PSMB7P1-201ENST00000556349 514 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP88Q99567 AC090181.2-201ENST00000602975 672 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 AC073114.1-201ENST00000612027 490 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AL445567.2-201ENST00000618935 498 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP88Q99567 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP88Q99567 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUP88Q99567 CR381670.1-201ENST00000624291 1693 ntBASIC5.18□□□□□ -1.58
NUP88Q99567 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP88Q99567 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 AC139769.1-204ENST00000472297 1931 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 AL121657.1-201ENST00000327215 531 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RPL21P132-201ENST00000331267 462 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RNU1-132P-201ENST00000364300 164 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RNA5SP515-201ENST00000364570 118 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RNU6-1226P-201ENST00000384317 107 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 AC004987.3-201ENST00000413879 771 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AC019178.2-201ENST00000423595 505 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP88Q99567 RPL23AP52-201ENST00000439311 478 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AL589765.3-201ENST00000446084 462 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 RPS20P21-201ENST00000466859 343 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NUP88Q99567 RPS6P4-201ENST00000494693 758 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP88Q99567 MTCYBP37-201ENST00000510642 1133 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 LTV1P1-201ENST00000510683 1237 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP88Q99567 RN7SKP82-201ENST00000516786 223 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP88Q99567 DEFB131D-201ENST00000526803 184 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP88Q99567 TOMM20P2-201ENST00000540082 421 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP88Q99567 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP88Q99567 AL109766.1-201ENST00000555080 552 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 RPL21P7-201ENST00000557463 483 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 CYCSP2-201ENST00000558168 301 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP88Q99567 AC103792.1-201ENST00000603591 919 ntBASIC5.17□□□□□ -1.58
NUP88Q99567 AL596327.1-201ENST00000603629 213 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms