Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHOX2BQ99453 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
PHOX2BQ99453 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHOX2BQ99453 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHOX2BQ99453 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHOX2BQ99453 IQCB2P-201ENST00000401788 1633 ntBASIC6.76□□□□□ -1.33
PHOX2BQ99453 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.76□□□□□ -1.33
PHOX2BQ99453 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHOX2BQ99453 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC110597.1-201ENST00000562669 3176 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC122713.2-201ENST00000624942 3335 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 RNU6-306P-201ENST00000384617 107 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 SNRPEP6-201ENST00000407465 277 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 DPPA2P3-201ENST00000411853 655 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC093106.2-201ENST00000428212 385 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC096775.1-201ENST00000437724 448 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AL163193.1-201ENST00000444895 788 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC008264.1-201ENST00000447612 367 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 PPIAP27-201ENST00000453800 265 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC087884.1-201ENST00000469738 328 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC097486.1-201ENST00000515331 210 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 Y_RNA.700-201ENST00000516806 100 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 IGLV2-28-201ENST00000520681 304 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC091925.2-201ENST00000625059 256 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 DDX10P1-201ENST00000448545 1933 ntBASIC6.75□□□□□ -1.33
PHOX2BQ99453 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
PHOX2BQ99453 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PHOX2BQ99453 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 UG0898H09-202ENST00000623646 7040 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 Y_RNA.14-201ENST00000362415 103 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 MTATP6P29-201ENST00000415057 132 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 UBE2FP1-201ENST00000416536 447 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 RPL23AP33-201ENST00000442301 452 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 PFN1P11-201ENST00000445829 389 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 RPL36AP39-201ENST00000445859 318 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 RPL23AP28-201ENST00000448062 470 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC073850.1-201ENST00000449243 255 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 snoU109.4-201ENST00000458953 143 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC084198.1-201ENST00000477747 402 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AP000926.1-201ENST00000479573 241 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 RPL21P103-201ENST00000479921 488 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AP002453.1-201ENST00000492327 668 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC022447.4-201ENST00000504053 364 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 GAPDHP62-201ENST00000515313 990 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 RNA5SP271-201ENST00000516700 88 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC103783.1-201ENST00000520506 373 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms