Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL391840.1-201ENST00000571144 367 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL512782.1-201ENST00000603093 364 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 LLPHP1-201ENST00000603571 367 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL391358.1-201ENST00000605342 190 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC100827.5-201ENST00000615883 426 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC091953.3-201ENST00000623220 236 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 MTND5P42-201ENST00000637720 498 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AP001642.1-201ENST00000624727 2117 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL022578.1-201ENST00000439330 1433 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 CCT4P2-201ENST00000233836 1548 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-1227P-201ENST00000383981 107 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RNA5SP105-201ENST00000391123 113 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RNA5SP113-201ENST00000410486 84 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 BTF3L4P3-201ENST00000418879 476 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC093698.1-201ENST00000423843 571 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MTCO1P20-201ENST00000425366 358 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MTCO1P54-201ENST00000430139 712 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC092162.1-201ENST00000432828 434 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL450263.2-201ENST00000439400 589 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 PDSS1P2-201ENST00000449397 678 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC022364.2-201ENST00000457963 554 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RN7SL809P-201ENST00000482040 297 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ACTG1P13-201ENST00000486987 1043 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RN7SL591P-201ENST00000496150 292 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 SETP14-201ENST00000497538 873 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 NIFKP7-201ENST00000503365 834 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 DYNLL1P6-201ENST00000503440 264 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC108078.1-201ENST00000508073 725 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 NDUFB4P2-201ENST00000509515 391 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ENPP7P9-201ENST00000514456 627 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-1225P-201ENST00000516336 65 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RN7SKP31-201ENST00000516354 278 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 CDH12P4-201ENST00000517835 295 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 CDH12P3-201ENST00000517935 295 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 CDH12P1-201ENST00000518435 295 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008802.1-201ENST00000519121 791 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MTND1P35-201ENST00000526739 508 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC137768.1-201ENST00000549998 553 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL390726.5-202ENST00000564800 256 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC015917.1-201ENST00000579654 510 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC073091.2-201ENST00000603205 907 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC010424.2-201ENST00000607594 443 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AL359880.1-201ENST00000621879 266 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 Z99496.1-201ENST00000469424 1477 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 SAMMSON-226ENST00000642089 1582 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 AC021242.1-201ENST00000507315 2035 ntBASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP1Q96SZ6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.58-201ENST00000362807 102 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms