Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC42Q96M95 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC42Q96M95 AC006065.5-201ENST00000623427 349 ntBASIC3.39□□□□□ -1.87
CCDC42Q96M95 AC016717.3-201ENST00000624730 554 ntBASIC3.39□□□□□ -1.87
CCDC42Q96M95 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC42Q96M95 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC42Q96M95 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC42Q96M95 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 RPS29P4-201ENST00000414733 161 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 RPL5P13-201ENST00000462840 709 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 RN7SL283P-201ENST00000489055 303 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC023141.12-201ENST00000512399 199 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 RNA5SP385-201ENST00000515947 110 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 RN7SKP43-201ENST00000516173 320 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC010198.2-201ENST00000550612 259 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 MIR3922-201ENST00000585192 84 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC015849.2-201ENST00000605738 409 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 AC019080.5-201ENST00000624891 757 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 CR392039.4-201ENST00000624968 501 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC42Q96M95 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CCDC42Q96M95 MTND5P19-201ENST00000424872 1794 ntBASIC3.38□□□□□ -1.87
CCDC42Q96M95 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC42Q96M95 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 RNA5SP50-201ENST00000363731 107 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC110754.1-201ENST00000399740 601 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AL445189.1-201ENST00000405722 338 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 OR1AA1P-201ENST00000419597 916 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 SDCBPP3-201ENST00000419629 891 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC091390.1-201ENST00000433904 331 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC108734.1-201ENST00000439549 399 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 RPS7P5-201ENST00000441482 581 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 RPL31P53-201ENST00000457065 348 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC092754.2-201ENST00000463506 460 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 PRDX3P4-201ENST00000470828 747 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 OR8I1P-201ENST00000529291 931 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 PTP4A1P6-201ENST00000531034 478 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC055876.1-202ENST00000567053 138 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 MIR4506-201ENST00000584693 77 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC016877.3-201ENST00000606778 504 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AL354976.1-201ENST00000613843 387 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC009464.1-201ENST00000615731 469 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AL355365.1-201ENST00000616480 294 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC42Q96M95 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC42Q96M95 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC42Q96M95 ZNF33CP-201ENST00000432492 2030 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC42Q96M95 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
CCDC42Q96M95 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC42Q96M95 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 RPL23AP57-201ENST00000332361 466 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 SNORA31-201ENST00000362607 130 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 HMGB1P10-201ENST00000395823 563 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC007064.3-201ENST00000422608 359 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC018644.1-201ENST00000429934 551 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC244505.4-201ENST00000434905 287 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 SSXP5-201ENST00000443473 287 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC42Q96M95 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
CCDC42Q96M95 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms