Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC012213.2-201ENST00000562917 4597 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AL391987.6-201ENST00000305671 199 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 RNU6-682P-201ENST00000363843 106 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 RNU1-85P-201ENST00000364127 164 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 Y_RNA.277-201ENST00000364754 102 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 RNU6-1117P-201ENST00000384525 104 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 RN7SKP271-201ENST00000410528 320 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 RPL30P2-201ENST00000414021 291 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 RPL37P1-201ENST00000432310 284 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 RN7SL329P-201ENST00000467740 299 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC117503.1-201ENST00000472241 394 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC006499.3-201ENST00000506077 748 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC074198.2-201ENST00000508153 258 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 HMGN1P28-201ENST00000521340 364 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC106782.4-201ENST00000568264 210 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 MIR6085-201ENST00000618314 110 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 AL450472.1-202ENST00000637286 180 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 AC062029.1-202ENST00000606164 3651 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 LINC02019-201ENST00000608605 2060 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 RACGAP1P-201ENST00000550663 1879 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AP002833.3-201ENST00000625075 2265 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 Y_RNA.577-201ENST00000384794 101 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 MIR199B-201ENST00000384849 110 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 MIR640-201ENST00000385086 96 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL136372.1-201ENST00000403060 228 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL138885.1-201ENST00000405921 675 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RNU6-1156P-201ENST00000410365 100 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL035660.1-201ENST00000422041 222 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RPL23AP69-201ENST00000431134 458 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RPL36AP6-201ENST00000435770 321 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 OR3D1P-201ENST00000438288 955 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RPL7AP10-201ENST00000481016 791 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC098869.1-201ENST00000481627 292 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 UBA52P7-201ENST00000486088 380 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RPL17P19-201ENST00000489069 552 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC096745.1-201ENST00000509945 370 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RNA5SP434-201ENST00000516647 121 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 RNU6-323P-201ENST00000521915 107 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AP000648.1-201ENST00000529682 397 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC026371.1-201ENST00000551867 419 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AP003115.1-201ENST00000569849 463 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 RN7SL208P-201ENST00000577964 296 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AC002044.1-201ENST00000606707 158 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 BX284668.6-201ENST00000606899 438 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 AL034408.1-201ENST00000637712 664 ntBASIC6.92□□□□□ -1.3
LRCH3Q96II8 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.92□□□□□ -1.3
LRCH3Q96II8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
LRCH3Q96II8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms