Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 snoU13.4-201ENST00000458916 104 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 PLGLA-201ENST00000465668 449 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC098799.1-201ENST00000504752 800 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 BOLA3P3-201ENST00000505182 232 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AP003066.2-201ENST00000529375 555 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 MTCYBP27-201ENST00000555160 670 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 PSMB7P1-201ENST00000556349 514 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC107982.3-201ENST00000584957 985 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 Z98200.1-201ENST00000607298 470 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 AL159169.3-201ENST00000608871 561 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 MLECP1-201ENST00000615893 709 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VMP1Q96GC9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
VMP1Q96GC9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VMP1Q96GC9 AC244517.1-201ENST00000606030 2086 ntBASIC4.06□□□□□ -1.76
VMP1Q96GC9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VMP1Q96GC9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 RNU6-236P-201ENST00000363886 106 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 RNA5SP175-201ENST00000364275 119 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 SNORA51.6-201ENST00000384151 125 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AL024474.1-201ENST00000404655 591 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 BOLA3P4-201ENST00000418151 400 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AL139095.3-201ENST00000419672 1203 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 TCEA1P2-201ENST00000420496 906 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC092647.1-201ENST00000420654 287 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 EIF1P3-201ENST00000423841 334 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC092634.2-201ENST00000428146 1010 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 ARF4P4-201ENST00000439608 520 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 MTCO1P48-201ENST00000448024 1096 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 RN7SL860P-201ENST00000473738 223 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VMP1Q96GC9 HMGN1P15-201ENST00000513870 295 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC104417.1-201ENST00000523974 751 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 PHBP17-201ENST00000528576 541 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC087481.2-201ENST00000565492 330 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 RPL23AP87-202ENST00000573039 466 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC023575.1-201ENST00000580510 358 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 IPO5P1-202ENST00000600039 287 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AL160290.3-201ENST00000604869 165 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC099785.1-201ENST00000605697 437 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC114781.5-201ENST00000615297 108 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AL021997.2-201ENST00000615674 271 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 AC040168.1-201ENST00000623594 991 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 ZNF663P-202ENST00000641770 1131 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
VMP1Q96GC9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VMP1Q96GC9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VMP1Q96GC9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.05□□□□□ -1.76
VMP1Q96GC9 AP002001.2-201ENST00000529025 1469 ntBASIC4.05□□□□□ -1.76
VMP1Q96GC9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.04□□□□□ -1.76
VMP1Q96GC9 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VMP1Q96GC9 RNU6-492P-201ENST00000363035 104 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.04□□□□□ -1.76
VMP1Q96GC9 DEFB109C-201ENST00000382575 264 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 DEFB109B-201ENST00000382656 264 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 OR6C69P-201ENST00000394268 893 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AL603865.2-201ENST00000401679 213 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AL049693.1-201ENST00000402760 611 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 RPL23AP47-201ENST00000408017 460 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 KRR1P1-201ENST00000419430 803 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.04□□□□□ -1.76
VMP1Q96GC9 RPL23AP52-201ENST00000439311 478 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AC092393.1-201ENST00000439625 742 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AL512326.1-201ENST00000443050 721 ntBASIC4.04□□□□□ -1.76
VMP1Q96GC9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms