Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 HMGB3P23-201ENST00000414981 585 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TOMM22P1-201ENST00000418578 312 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 ELOCP13-201ENST00000443934 329 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC104689.1-201ENST00000473356 768 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 RN7SL132P-201ENST00000478131 296 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AP000563.1-201ENST00000490865 758 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 SNORA70.17-201ENST00000516449 133 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC109635.4-202ENST00000531666 412 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 EIF1AXP2-201ENST00000555940 413 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC009268.1-201ENST00000561352 1203 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC005951.1-201ENST00000576706 485 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AC022916.3-201ENST00000592961 742 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AL451074.6-201ENST00000608512 729 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 AL390240.1-201ENST00000612950 384 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLHC1Q8NHS4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 HSPA8P19-201ENST00000505359 1517 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 RNA5SP129-201ENST00000410276 118 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 RPS15AP1-201ENST00000457423 391 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 RPL21P8-201ENST00000465083 535 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AP000926.4-201ENST00000527351 454 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 AC069209.1-201ENST00000619282 651 ntBASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLHC1Q8NHS4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC073055.1-201ENST00000456901 1621 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RAD1P1-201ENST00000231383 813 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RNA5SP515-201ENST00000364570 118 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 MIR421-201ENST00000365696 85 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 MIR1193-201ENST00000408109 78 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 LIPT1P1-201ENST00000415870 1186 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 OSTCP5-201ENST00000425293 453 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AL357552.1-201ENST00000445254 415 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RPL7P59-201ENST00000447700 943 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RPS3AP46-201ENST00000448352 682 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RN7SKP13-201ENST00000515933 244 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 RANP9-201ENST00000519957 271 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AC074029.2-201ENST00000551045 634 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 BNIP3P5-201ENST00000562290 498 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 ADAM3B-201ENST00000569937 840 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms