Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC018638.8-201ENST00000588755 281 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC008782.1-201ENST00000603386 430 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AL391813.2-201ENST00000609113 322 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 BX323046.1-201ENST00000610145 535 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC007497.1-201ENST00000610421 561 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC011460.1-201ENST00000636268 1834 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 ZNF680P1-201ENST00000436625 1469 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 AC009962.1-201ENST00000567327 3813 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.68□□□□□ -1.5
PHC3Q8NDX5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHC3Q8NDX5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RNU6-223P-201ENST00000362830 107 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RPL7P60-201ENST00000397636 735 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RNU2-9P-201ENST00000410194 145 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RN7SKP279-201ENST00000411383 298 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RPL12P9-201ENST00000412942 488 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC007390.1-201ENST00000415722 356 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AL358176.3-201ENST00000420757 454 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 CRIP1P1-201ENST00000427567 185 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 GAPDHP48-201ENST00000436626 961 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 NOP56P2-201ENST00000447491 769 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RPS17P15-201ENST00000475609 349 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC021382.1-201ENST00000483523 359 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RNU6-410P-201ENST00000517006 107 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RNA5SP337-201ENST00000517007 109 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC078899.1-201ENST00000521432 1185 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC092470.1-201ENST00000546187 132 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 OR4T1P-201ENST00000554933 911 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 ANP32BP3-201ENST00000559213 706 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC079075.1-201ENST00000559543 878 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 RPS3AP23-202ENST00000574601 686 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC098848.2-201ENST00000588023 330 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AL158801.5-201ENST00000623123 465 ntBASIC5.67□□□□□ -1.5
PHC3Q8NDX5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PHC3Q8NDX5 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RNU6-1158P-201ENST00000391167 107 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AL356057.2-201ENST00000403318 432 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC009302.1-201ENST00000417147 390 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RPS29P14-201ENST00000431518 171 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 HMGB3P24-201ENST00000433260 622 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RPL12P11-201ENST00000439970 501 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AL450996.1-201ENST00000445574 1202 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 CBWD4P-201ENST00000445695 655 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AL118496.2-201ENST00000448300 230 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC140076.1-201ENST00000449897 361 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC004129.2-201ENST00000457229 287 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 RN7SL197P-201ENST00000466981 299 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms