Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 SNORD39.2-201ENST00000579995 76 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 MIR92B-201ENST00000607575 96 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL356274.1-201ENST00000617064 410 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC092794.2-201ENST00000620933 563 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL023881.1-201ENST00000621088 301 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC018816.2-201ENST00000621460 353 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AP000648.2-201ENST00000624182 404 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC108467.2-201ENST00000617640 1597 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC022893.2-201ENST00000564832 3296 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC021146.4-201ENST00000309229 279 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RN7SKP226-201ENST00000364912 300 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 MIR320B1-201ENST00000390209 79 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 Y_RNA.582-201ENST00000391023 95 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 Z98745.1-201ENST00000402553 494 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RN7SKP56-201ENST00000410513 331 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC011933.1-201ENST00000413334 321 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 Z97055.1-201ENST00000419730 712 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL512649.1-201ENST00000428997 581 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL365184.2-201ENST00000431139 435 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 BMS1P19-201ENST00000433925 393 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC114755.5-201ENST00000447760 831 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC116533.1-201ENST00000459748 321 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RPL7P48-201ENST00000461513 746 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RPL7P19-201ENST00000469948 618 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 HMGB1P36-201ENST00000487709 576 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC111193.1-201ENST00000504097 155 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RNY4P37-201ENST00000516225 96 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RNA5SP135-201ENST00000517019 125 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AP000827.1-201ENST00000527814 258 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC087276.1-201ENST00000529659 480 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 DUX4L52-201ENST00000549363 777 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AP004247.3-201ENST00000608682 624 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL159169.3-201ENST00000608871 561 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AL353726.1-201ENST00000614041 1000 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RNA5SP196-201ENST00000625967 102 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 MTCO1P23-201ENST00000415223 1526 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 ELF2P3-201ENST00000445099 1506 ntBASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC44A3Q8N4M1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPS26P8-201ENST00000393490 348 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPL23AP29-201ENST00000397284 453 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms