Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 RNU6-98P-201ENST00000384173 107 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 RPS15AP6-201ENST00000420703 385 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 HSPD1P21-201ENST00000436541 245 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 MTCYBP21-201ENST00000443300 1113 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC010468.1-201ENST00000461022 817 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC092754.2-201ENST00000463506 460 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 RPL23AP67-201ENST00000465341 474 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 TRBV8-2-201ENST00000475637 270 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC020893.1-201ENST00000502452 580 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC103833.1-201ENST00000517442 172 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 MIR4425-201ENST00000580572 84 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC011816.2-201ENST00000607089 556 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC090425.2-201ENST00000608818 501 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC006065.5-201ENST00000623427 349 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC110801.1-201ENST00000623590 212 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 CR392039.4-201ENST00000624968 501 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC65Q8IXS2 AC032011.1-201ENST00000611703 1549 ntBASIC3.84□□□□□ -1.8
CCDC65Q8IXS2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC65Q8IXS2 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.8
CCDC65Q8IXS2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 RNA5SP295-201ENST00000362655 121 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 RSL24D1P1-201ENST00000404972 493 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 XKRYP4-201ENST00000414395 483 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AP000907.1-201ENST00000428428 510 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL035458.1-201ENST00000433096 585 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC073063.1-201ENST00000434352 607 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 RPL21P23-201ENST00000446654 460 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 XKRYP5-201ENST00000449659 483 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 TPMTP4-201ENST00000450749 678 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC010285.3-201ENST00000511668 676 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC026403.1-201ENST00000518938 295 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL139174.1-201ENST00000531489 886 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 OR4U1P-201ENST00000554958 912 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 NF1P5-201ENST00000588287 448 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC015849.2-201ENST00000605738 409 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 SNORA51-201ENST00000606420 132 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL354696.1-201ENST00000614652 497 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC024023.1-201ENST00000624530 922 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AC012442.3-202ENST00000636742 206 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 ZNF90P1-201ENST00000480493 1951 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 AL079305.1-201ENST00000623159 3008 ntBASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC65Q8IXS2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL645937.1-201ENST00000641739 1652 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 SNORA48.8-201ENST00000391324 134 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 TAF9BP2-201ENST00000400856 499 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 ATP5JP1-201ENST00000431631 322 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AC092641.1-201ENST00000440229 772 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms