Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 CENPUP2-201ENST00000555897 1186 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 TRAV15-201ENST00000556680 249 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 SULT1C2P1-202ENST00000562418 459 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC015912.2-201ENST00000571053 181 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL354943.1-201ENST00000572103 781 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 SNORD39.3-201ENST00000584451 71 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 VN1R82P-201ENST00000601481 356 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL445363.3-201ENST00000623080 671 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC000123.2-201ENST00000623124 461 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 CR392039.5-201ENST00000623201 510 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 MIR1322-201ENST00000638013 71 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC092447.3-201ENST00000426027 686 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 PSMA2P3-201ENST00000429685 675 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL445584.1-201ENST00000431451 330 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 GOT2P5-201ENST00000433995 546 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL356276.2-201ENST00000435919 558 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 MTND1P26-201ENST00000440488 538 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ARL4AP3-201ENST00000441452 574 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 FGF7P5-201ENST00000441829 291 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 TRBV26-201ENST00000456572 344 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL139824.2-201ENST00000458731 1095 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ACTG1P13-201ENST00000486987 1043 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 IFITM8P-201ENST00000522529 394 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC090502.2-201ENST00000549267 280 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 VN1R78P-201ENST00000597393 564 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 ELOCP35-201ENST00000604289 336 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL354984.3-201ENST00000604803 325 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC008966.2-201ENST00000606157 453 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC080013.3-201ENST00000606839 578 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AL355493.4-201ENST00000618530 292 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 AC005086.4-201ENST00000623065 213 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 Z73965.1-201ENST00000623412 2297 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 SAGE4P-201ENST00000442271 3381 ntBASIC4.67□□□□□ -1.66
HERC6Q8IVU3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HERC6Q8IVU3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RNA5SP175-201ENST00000364275 119 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RNU6-83P-201ENST00000384568 112 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 MIR449B-201ENST00000384995 97 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RN7SKP182-201ENST00000410772 298 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RPS20P14-201ENST00000412545 360 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 LUZP4P1-201ENST00000415420 344 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms