Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ELOCP3-201ENST00000439303 348 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 RPS3AP46-201ENST00000448352 682 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 MTND2P30-201ENST00000456663 382 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 HMGB3P30-201ENST00000457863 606 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC008565.1-201ENST00000509046 885 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 NPM1P41-201ENST00000512920 831 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC026402.1-201ENST00000513642 170 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC083923.1-201ENST00000523708 376 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC136624.4-201ENST00000573044 370 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC008507.1-201ENST00000587506 734 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC007687.1-201ENST00000602704 304 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC119501.1-201ENST00000603646 475 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AL392112.1-201ENST00000605115 829 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AL163051.2-201ENST00000618976 735 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 AP003355.3-201ENST00000623465 114 ntBASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC50Q8IVM0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 RNU2-21P-201ENST00000410368 188 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 RAB28P1-201ENST00000411517 641 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 GLRXP1-201ENST00000423261 334 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 BX890604.2-201ENST00000427883 474 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 RPS26P30-201ENST00000443431 335 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC104689.1-201ENST00000473356 768 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 DUXAP6-201ENST00000553858 601 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC099676.1-201ENST00000608886 657 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 AC069209.1-201ENST00000619282 651 ntBASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC50Q8IVM0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 ENSAP3-201ENST00000312710 333 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RNA5SP27-201ENST00000363839 119 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RN7SKP227-201ENST00000364445 330 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RNA5SP479-201ENST00000364858 117 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RNU6-650P-201ENST00000365658 111 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AL445183.3-201ENST00000414168 502 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 HMGB3P23-201ENST00000414981 585 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC093578.1-201ENST00000415219 368 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 VN1R42P-201ENST00000424651 344 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RPS20P32-201ENST00000456044 356 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC025768.1-201ENST00000510057 267 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 MTCO1P30-201ENST00000515244 580 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 RN7SKP82-201ENST00000516786 223 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 SNORA76.2-201ENST00000517095 137 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC022916.3-201ENST00000592961 742 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AL021368.1-201ENST00000607490 540 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 OR2BH1P-201ENST00000608850 864 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AL590396.2-201ENST00000636511 1041 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 MTCO1P18-201ENST00000455518 1419 ntBASIC3.69□□□□□ -1.82
CCDC50Q8IVM0 AC007496.3-201ENST00000624987 3443 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms