Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC127502.3-201ENST00000636170 1206 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC000123.3-201ENST00000624029 4975 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC025031.4-201ENST00000621248 3271 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RNA5SP175-201ENST00000364275 119 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 TAF9BP1-201ENST00000396646 746 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RNU2-66P-201ENST00000410650 161 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RPS23P10-201ENST00000416185 486 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 MED14P1-201ENST00000430517 648 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 MRPS10P2-201ENST00000431226 381 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 NEK4P1-201ENST00000433383 879 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 MTND1P30-201ENST00000441241 901 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL353572.1-201ENST00000442490 417 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 ST13P20-201ENST00000447996 1065 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL591623.2-201ENST00000449978 222 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 OR6C5P-201ENST00000452388 923 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 CFTRP1-201ENST00000456646 183 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RPS29P22-201ENST00000472363 168 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC006499.6-201ENST00000511169 607 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RPS27AP18-201ENST00000515536 459 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AP002812.4-201ENST00000532139 286 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC006064.5-201ENST00000541782 248 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 OR7K1P-201ENST00000546439 926 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL133241.1-201ENST00000556832 487 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC234778.2-201ENST00000566241 354 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC067959.1-201ENST00000604334 379 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC112220.3-201ENST00000605502 502 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL031666.3-201ENST00000609320 1006 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL356274.1-201ENST00000617064 410 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC008013.2-202ENST00000637965 364 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC099063.3-201ENST00000642066 185 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AC090017.1-201ENST00000548612 1779 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF549Q6P9A3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 MIR217-201ENST00000384817 110 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.25□□□□□ -1.73
ZNF549Q6P9A3 Z95327.2-201ENST00000414579 1873 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms