Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 ZNF833P-201ENST00000424938 1494 ntBASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 SNRPEP3-201ENST00000338402 276 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNU6-500P-201ENST00000362349 107 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.18-201ENST00000362461 102 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNU1-85P-201ENST00000364127 164 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNU6-374P-201ENST00000364146 108 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNU6-660P-201ENST00000364566 109 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNA5SP509-201ENST00000364577 119 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 MT-TH-201ENST00000387441 69 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 SNORA57.1-201ENST00000391227 145 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 SNORA26.8-201ENST00000391306 124 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.604-201ENST00000410574 102 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RN7SKP263-201ENST00000411194 309 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 UBE2V1P10-201ENST00000414685 269 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AL590609.2-201ENST00000421430 368 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 CDC27P1-201ENST00000445384 715 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC010424.1-201ENST00000506336 297 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC109927.2-201ENST00000506416 303 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNU1-6P-201ENST00000516290 144 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 ROCK1P1-201ENST00000573767 549 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC107982.3-201ENST00000584957 985 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC024560.3-201ENST00000608482 349 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AL158063.1-201ENST00000615349 536 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 AC073968.1-201ENST00000618594 637 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 MTCO1P14-201ENST00000441695 1559 ntBASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A4Q53GD3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 OR10J6P-201ENST00000289731 930 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 SNORA73.1-201ENST00000363107 205 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 RNU6-441P-201ENST00000384545 106 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 SNRPEP2-201ENST00000397592 279 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 SDCBPP2-201ENST00000424643 885 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 MTND2P20-201ENST00000440805 661 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 TRGVB-201ENST00000453257 471 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ZNF114P1-201ENST00000453500 292 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 CYCSP34-201ENST00000458172 304 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AL024509.2-201ENST00000493462 493 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 SNX5P1-201ENST00000505757 1041 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC018797.3-201ENST00000513388 1241 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 RNU6-583P-201ENST00000516012 92 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ARL2BPP5-201ENST00000523141 481 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 MIR4801-201ENST00000582704 82 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms