Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL592156.1-201ENST00000508758 304 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 USP9YP5-201ENST00000511770 630 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 HSPA8P13-201ENST00000523715 472 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL353778.1-201ENST00000603149 408 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL355812.1-201ENST00000603215 216 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 RPL23AP92-201ENST00000603609 255 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL357094.1-201ENST00000603845 844 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 BNIP3P11-201ENST00000603878 563 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC073968.1-201ENST00000618594 637 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC103591.2-201ENST00000265259 766 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC067945.1-201ENST00000342609 618 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 RNU6-339P-201ENST00000384310 107 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 MTND4LP20-201ENST00000402379 270 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AL049697.2-201ENST00000403708 294 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 MTCYBP38-201ENST00000417160 1123 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC098592.1-201ENST00000419352 333 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC127537.2-201ENST00000439258 465 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 SNORD108-201ENST00000459332 71 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC097493.1-201ENST00000463958 372 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC083982.1-201ENST00000485679 344 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 RPL36AP41-201ENST00000493820 306 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC008694.2-201ENST00000517591 306 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 MTND2P38-201ENST00000522536 667 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 BRD9P1-201ENST00000529855 560 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 OR6C73P-201ENST00000546432 358 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 CYCSP2-201ENST00000558168 301 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC124312.4-201ENST00000605533 310 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC080013.4-201ENST00000607624 649 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC091905.2-201ENST00000623143 306 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC004943.3-201ENST00000624116 600 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 MTND5P3-201ENST00000438536 1800 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC38Q502W7 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC38Q502W7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.66□□□□□ -1.66
CCDC38Q502W7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC38Q502W7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC38Q502W7 AL031985.3-201ENST00000565390 2449 ntBASIC4.65□□□□□ -1.66
CCDC38Q502W7 AP002907.1-201ENST00000606361 1430 ntBASIC4.65□□□□□ -1.66
CCDC38Q502W7 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
CCDC38Q502W7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CCDC38Q502W7 U3.15-201ENST00000365398 212 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 RNU5A-2P-201ENST00000384337 116 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 Z98745.1-201ENST00000402553 494 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC069213.2-201ENST00000420238 366 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC012065.2-201ENST00000421295 375 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AL953862.1-201ENST00000423016 168 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms