Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 RNU5F-6P-201ENST00000362979 116 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 RNU6-777P-201ENST00000364265 104 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 MIR153-1-201ENST00000384914 90 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 U8.14-201ENST00000390843 143 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL138880.1-201ENST00000405824 642 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 MTCO2P34-201ENST00000421994 607 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC091390.1-201ENST00000433904 331 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 MTCO1P19-201ENST00000443487 500 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC239367.2-201ENST00000447309 705 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 SSXP1-201ENST00000453640 473 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 OR6K1P-201ENST00000456766 971 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 RPS20P24-201ENST00000457473 361 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL591473.1-201ENST00000464297 313 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 RN7SL354P-201ENST00000469282 294 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 OR6C73P-201ENST00000546432 358 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC090615.1-201ENST00000577519 154 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 MIR544B-201ENST00000582372 78 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC022146.1-201ENST00000595307 847 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC239868.4-201ENST00000608318 671 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL359715.5-201ENST00000623431 443 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AC026951.1-201ENST00000559530 2459 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 RNU6-356P-201ENST00000384140 107 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 Z97055.1-201ENST00000419730 712 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC009238.2-201ENST00000431026 355 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC016712.1-201ENST00000431088 378 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC109583.1-201ENST00000432156 268 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 SKP1P1-201ENST00000438081 489 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AL592447.1-201ENST00000447592 540 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC093267.1-201ENST00000489176 961 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC034222.1-201ENST00000494052 532 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 CBX3P3-201ENST00000508108 532 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC093853.1-201ENST00000515689 483 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 RNU2-30P-201ENST00000516209 141 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 IGHV3-32-201ENST00000519182 355 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC005868.1-201ENST00000536421 331 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC090181.2-201ENST00000602975 672 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AL390208.1-201ENST00000605885 644 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC099669.2-201ENST00000616549 437 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC131238.1-201ENST00000617135 328 ntBASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144BQ3MJ40 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms