Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 SERPINE4P-201ENST00000554978 281 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.85□□□□□ -1.79
CNTN1Q12860 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.85□□□□□ -1.79
CNTN1Q12860 AP001542.2-201ENST00000593141 364 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 AC104985.3-201ENST00000623479 597 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CNTN1Q12860 AP003485.1-201ENST00000625093 753 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.85□□□□□ -1.79
CNTN1Q12860 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN1Q12860 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CNTN1Q12860 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN1Q12860 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN1Q12860 MAPK10-253ENST00000641010 4072 ntBASIC3.85□□□□□ -1.79
CNTN1Q12860 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN1Q12860 AL592437.2-201ENST00000421655 2434 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CNTN1Q12860 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 ANKRD36P1-201ENST00000344424 659 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 SNORA71.3-201ENST00000362582 128 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 RNU6-1293P-201ENST00000384077 107 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CNTN1Q12860 SFR1P1-201ENST00000403720 688 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 RNA5SP39-201ENST00000411245 120 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 RNU6-575P-201ENST00000411326 105 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 MTND4P3-201ENST00000417829 541 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 SAGE2P-201ENST00000420011 2126 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC096638.2-201ENST00000434965 711 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 MTCO1P53-201ENST00000441633 699 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CNTN1Q12860 RPS17P13-201ENST00000448974 407 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 TVP23BP2-201ENST00000455082 615 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.84□□□□□ -1.79
CNTN1Q12860 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 RPL7P15-201ENST00000461190 712 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 UBE2CP3-201ENST00000502715 450 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC118282.2-201ENST00000508739 374 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AC110792.2-201ENST00000510278 224 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 RNU1-95P-201ENST00000516357 160 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 RNU1-128P-201ENST00000516704 160 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 DEFB109D-201ENST00000529497 240 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 MIR4644-201ENST00000579929 84 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC112220.2-201ENST00000605513 533 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AC024060.1-201ENST00000607052 494 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 AP000238.1-201ENST00000608759 426 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 RNU6-156P-201ENST00000621869 107 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
CNTN1Q12860 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.79
CNTN1Q12860 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN1Q12860 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CNTN1Q12860 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.84□□□□□ -1.8
CNTN1Q12860 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CNTN1Q12860 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CNTN1Q12860 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTN1Q12860 AL049555.1-201ENST00000562834 1933 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 XPOTP1-201ENST00000443317 2398 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CNTN1Q12860 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CNTN1Q12860 RNU6-619P-201ENST00000365146 108 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
CNTN1Q12860 RNU6-1279P-201ENST00000383917 103 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 SNORA5A-201ENST00000384111 134 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AMD1P2-201ENST00000412936 992 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AC069157.1-201ENST00000421749 137 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 C1DP1-201ENST00000426049 402 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AC087650.1-201ENST00000431445 468 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AL358232.1-201ENST00000448030 501 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AC091153.1-201ENST00000466297 402 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms