Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NCOR1P1-202ENST00000486162 291 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC021146.5-201ENST00000503544 545 ntBASIC3□□□□□ -1.93
H3F3AP84243 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3□□□□□ -1.93
H3F3AP84243 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3□□□□□ -1.93
H3F3AP84243 MIR2276-201ENST00000516886 89 ntBASIC3□□□□□ -1.93
H3F3AP84243 NDUFB9P3-201ENST00000521269 501 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 EIF4EP5-201ENST00000528228 640 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3□□□□□ -1.93
H3F3AP84243 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3□□□□□ -1.93
H3F3AP84243 AC006518.1-201ENST00000541449 943 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC005476.1-201ENST00000554427 397 ntBASIC3□□□□□ -1.93
H3F3AP84243 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3□□□□□ -1.93
H3F3AP84243 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3□□□□□ -1.93
H3F3AP84243 PCNAP1-202ENST00000595299 752 ntBASIC3□□□□□ -1.93
H3F3AP84243 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
H3F3AP84243 MIR7975-201ENST00000619350 68 ntBASIC3□□□□□ -1.93
H3F3AP84243 PLCE1P1-201ENST00000622094 305 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC007342.8-201ENST00000623278 678 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC009950.2-201ENST00000636548 183 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC021755.1-201ENST00000559747 1447 ntBASIC3□□□□□ -1.93
H3F3AP84243 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
H3F3AP84243 OFD1P5Y-201ENST00000447585 2590 ntBASIC3□□□□□ -1.93
H3F3AP84243 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3AP84243 HSPA8P19-201ENST00000505359 1517 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 MTND5P3-201ENST00000438536 1800 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
H3F3AP84243 RNA5SP197-201ENST00000363357 119 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AP000567.1-201ENST00000406413 156 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 RNA5SP293-201ENST00000410527 113 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 RPS3AP25-201ENST00000411660 793 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 HSFY4P-201ENST00000415994 1181 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AL513174.1-201ENST00000423182 629 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3AP84243 AL662791.1-201ENST00000441992 928 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 PRDX3P3-201ENST00000447765 522 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 SLC31A1P1-201ENST00000451221 567 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3AP84243 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 AC092754.2-201ENST00000463506 460 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 RN7SL442P-201ENST00000473804 320 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.99□□□□□ -1.93
H3F3AP84243 AC090071.1-201ENST00000507713 644 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 RNU4-60P-201ENST00000517239 135 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3AP84243 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3AP84243 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3AP84243 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3AP84243 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 SNORD39.4-201ENST00000620099 78 ntBASIC2.99□□□□□ -1.93
H3F3AP84243 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3AP84243 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3AP84243 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3AP84243 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.98□□□□□ -1.93
H3F3AP84243 MIR7-3-201ENST00000384898 110 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 MIR670-201ENST00000390142 98 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 RNA5SP171-201ENST00000391071 115 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 HMGB1P13-201ENST00000406019 642 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 HMGN1P24-201ENST00000412282 298 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 RPS7P13-201ENST00000413955 498 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AC093578.1-201ENST00000415219 368 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 AC012065.2-201ENST00000421295 375 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AL389915.1-201ENST00000422463 466 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 SETP5-201ENST00000437270 562 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.98□□□□□ -1.93
H3F3AP84243 AC034244.2-201ENST00000514668 858 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.98□□□□□ -1.93
H3F3AP84243 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3AP84243 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 NCAPGP2-201ENST00000557911 754 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3AP84243 MIR7973-1-201ENST00000614683 76 ntBASIC2.98□□□□□ -1.93
H3F3AP84243 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.98□□□□□ -1.93
H3F3AP84243 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms